CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc15128
(
Meloidogyne incognita
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Minc15128
T028988_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc15128
BED ZF
4
41
SSLWNHFIDIGGNSVICRHCSEHIKRGSALSHVRNSHN
Minc15128
BED ZF
49
92
QAVLEHFTKIDNGRDQGKLRCHHCRRKFDDHIHALNMHCLSHGI
Links
Other
BED ZF
family TFs
Other
Meloidogyne incognita
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G13310
Brachypodium distachyon
BRADI1G13310
N
MLOC_53826
Hordeum vulgare
MLOC_53826
N
OB03G35710
Oryza brachyantha
OB03G35710
N
OGLUM03G28710
Oryza glumaepatula
OGLUM03G28710
N
ONIVA03G29050
Oryza nivara
ONIVA03G29050
N
ORGLA03G0259500
Oryza glaberrima
ORGLA03G0259500
N
OS03G0655600
Oryza sativa
OS03G0655600
N
Pavir.Ia01109
Panicum virgatum
Pavir.Ia01109
N
Pavir.J39341
Panicum virgatum
Pavir.J39341
N
Sb01g012970
Sorghum bicolor
Sb01g012970
N
Si034021m.g
Setaria italica
Si034021m.g
N
Traes_4DS_01780A949
Triticum aestivum
Traes_4DS_01780A949
N