CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GPLIN_000010400
(
Globodera pallida
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
GPLIN_000010400
T029338_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000010400
BED ZF
130
174
HPVWTFFQDLRDSNGIGGVSCMHCDWTGDDRSPNNLKTHLKRCHD
Links
Other
BED ZF
family TFs
Other
Globodera pallida
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001057401
Anisakis simplex
ASIM_0001057401
N
ASU_11875
Ascaris suum
ASU_11875
N
D917_01996
Trichinella nativa
D917_01996
N
D917_10177
Trichinella nativa
D917_10177
N
D918_02747
Trichuris suis
D918_02747
N
DME_0000059301
Dracunculus medinensis
DME_0000059301
N
EVEC_0000194801
Enterobius vermicularis
EVEC_0000194801
N
L596_g11850
Steinernema carpocapsae
L596_g11850
N
L889_g22661
Steinernema feltiae
L889_g22661
N
L892_g11119
Steinernema scapterisci
L892_g11119
N
L893_g21958
Steinernema glaseri
L893_g21958
N
L898_g21717
Steinernema monticolum
L898_g21717
N
PTRK_0000987600
Parastrongyloides trichosuri
PTRK_0000987600
N
RSKR_0000468300
Rhabditophanes kr3021
RSKR_0000468300
N
RSKR_0000933225
Rhabditophanes kr3021
RSKR_0000933225
N
SMAR012298
Strigamia maritima
SMAR012298
I
SMUV_0000052701
Syphacia muris
SMUV_0000052701
N
SPAL_0000212800
Strongyloides papillosus
SPAL_0000212800
N
SSTP_0000048500
Strongyloides stercoralis
SSTP_0000048500
N
SVE_1729600
Strongyloides venezuelensis
SVE_1729600
N
TCNE_0000182901
Toxocara canis
TCNE_0000182901
N
TMUE_s0149000100
Trichuris muris
TMUE_s0149000100
N