CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BHLH121
(
Arabidopsis thaliana
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AT3G19860
T030641_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18401.1
M01126_2.00
Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN
PBM
Lambert et al.(2019)
pTH11272
0.844
0.824
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G19860.1
bHLH
6
56
RKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELT
AT3G19860.2
bHLH
59
109
RKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELT
AT3G19860.3
bHLH
37
87
RKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELT
Links
Other
bHLH
family TFs
Other
Arabidopsis thaliana
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00008p00092930
Amborella trichopoda
AMTR_s00008p00092930
I
Bra017500
Brassica rapa
Bra017500
I
evm.TU.supercontig_74.95
Carica papaya
evm.TU.supercontig_74.95
I
F775_19309
Aegilops tauschii
F775_19309
I
LjSGA_060304.1
Lotus japonicus
LjSGA_060304.1
I
MDP0000129092
Malus domestica
MDP0000129092
I
PGSC0003DMG400044001
Solanum tuberosum
PGSC0003DMG400044001
N
SapurV1A.0201s0160
Salix purpurea
SapurV1A.0201s0160
I