CGI_10026944 (Crassostrea gigas)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 CGI_10026944 T032150_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.886 0.942
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.886 0.942
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.886 0.942
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.886 0.942
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.886 0.942
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.886 0.942
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.886 0.923
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.886 0.923
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.886 0.923
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.886 0.923
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.886 0.923
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.886 0.923
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.886 0.923
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.886 0.923
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.886 0.923
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC39937 bHLH 30 82

Links

Other bHLH family TFs
Other Crassostrea gigas TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1967_YBR240C Saccharomyces paradoxus 1967_YBR240C I
2117_YBR240C Saccharomyces bayanus 2117_YBR240C I
4848_YBR240C Saccharomyces mikatae 4848_YBR240C I
AACERI_AaceriAFL033W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL033W I
AGOS_AFL033W Ashbya gossypii AGOS_AFL033W I
Ecym_2263 Eremothecium cymbalariae Ecym_2263 I
KAFR_0G03520 Kazachstania africana KAFR_0G03520 I
KLLA0_F10373g Kluyveromyces lactis KLLA0_F10373g I
KLTH0H05720g Lachancea thermotolerans KLTH0H05720g I
KLTH0H05720g Kluyveromyces thermotolerans KLTH0H05720g I
Kpol_534p28 Vanderwaltozyma polyspora Kpol_534p28 I
Kwal_1631 Kluyveromyces waltii Kwal_1631 I
LALA0_S13e03268g Lachancea lanzarotensis LALA0_S13e03268g I
NCAS_0H01240 Naumovozyma castellii NCAS_0H01240 I
NDAI_0F02050 Naumovozyma dairenensis NDAI_0F02050 I
PV06_07668 Exophiala oligosperma PV06_07668 N
SAKL0A06072g Lachancea kluyveri SAKL0A06072g I
Scas_Contig597.4 Saccharomyces castellii Scas_Contig597.4 I
SKUD_138702 Saccharomyces kudriavzevii SKUD_138702 I
SU7_0277 Saccharomyces arboricola SU7_0277 I
TDEL_0B04000 Torulaspora delbrueckii TDEL_0B04000 I
THI2 Saccharomyces cerevisiae YBR240C D
ZBAI_07794 Zygosaccharomyces bailii ZBAI_07794 I
ZYRO0G21626g Zygosaccharomyces rouxii ZYRO0G21626g I