CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000026284
(
Astyanax mexicanus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSAMXG00000026284
T032970_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Olig3
M01745_2.00
Mus musculus
NWAHHATANNN
NNNTATDDTWN
PBM
Weirauch et al.(2014)
pTH5164
0.890
0.982
OLIG3
M02798_2.00
Homo sapiens
AMCATATGBY
RVCATATGKT
SELEX
Jolma et al.(2013)
OLIG3_1
0.890
0.982
OLIG3
M04175_2.00
Homo sapiens
RMCATATGSY
RSCATATGKY
SELEX
Yin et al.(2017)
OLIG3_FL_HT-SELEX
0.890
0.982
OLIG3
M04171_2.00
Homo sapiens
RMCATATGSY
RSCATATGKY
SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_1
0.890
0.982
OLIG3
M04172_2.00
Homo sapiens
AACAKMTGBT
AVCAKMTGTT
SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_2
0.890
0.982
OLIG3
M04176_2.00
Homo sapiens
RMCATATGGY
RCCATATGKY
SELEX
Yin et al.(2017)
OLIG3_FL_Methyl-HT-SELEX
0.890
0.982
OLIG3
M04173_2.00
Homo sapiens
RMCATATGSY
RSCATATGKY
SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_1
0.890
0.982
OLIG3
M04174_2.00
Homo sapiens
VACAKMTGKY
RMCAKMTGTB
SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_2
0.890
0.982
OLIG2
M02812_2.00
Homo sapiens
AMCATATGBY
RVCATATGKT
SELEX
Jolma et al.(2013)
OLIG2_1
0.870
0.945
OLIG2
M02813_2.00
Homo sapiens
AMCATATGBY
RVCATATGKT
SELEX
Jolma et al.(2013)
OLIG2_2
0.870
0.945
OLIG2
M04223_2.00
Homo sapiens
AACAKMTGTB
VACAKMTGTT
SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_1
0.870
0.945
OLIG2
M04224_2.00
Homo sapiens
AMCATATGKY
RMCATATGKT
SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_2
0.870
0.945
OLIG2
M08742_2.00
Homo sapiens
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN
Misc
Kulakovskiy et al.(2013)
OLIG2_HUMAN.H11MO.0.B
0.870
0.945
Olig2
M08771_2.00
Mus musculus
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN
Misc
Kulakovskiy et al.(2013)
OLIG2_MOUSE.H11MO.0.A
0.870
0.945
Olig2
M09477_2.00
Mus musculus
RVCAKMTGKH
DMCAKMTGBY
Misc
Heinz et al.(2010)
Neuron-Olig2_GSE30882
0.870
0.945
OLIG2
M04225_2.00
Homo sapiens
AACAKMTGKB
VMCAKMTGTT
SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_1
0.870
0.945
OLIG2
M04226_2.00
Homo sapiens
AMCATATGKT
AMCATATGKT
SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_2
0.870
0.945
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000026989
bHLH
31
85
LRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLS
Links
Other
bHLH
family TFs
Other
Astyanax mexicanus
TFs
108 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN946_scf185014.g111
Trametes cinnabarina
BN946_scf185014.g111
I
CY34DRAFT_301446
Suillus luteus
CY34DRAFT_301446
I
FIBRA_02011
Fibroporia radiculosa
FIBRA_02011
I
FOMPIDRAFT_1100359
Fomitopsis pinicola
FOMPIDRAFT_1100359
I
GALMADRAFT_77741
Galerina marginata
GALMADRAFT_77741
I
gw1.2.1743.1
Heterobasidion annosum
gw1.2.1743.1
I
HETIRDRAFT_242938
Heterobasidion irregulare
HETIRDRAFT_242938
I
HYDPIDRAFT_32921
Hydnomerulius pinastri
HYDPIDRAFT_32921
I
M413DRAFT_440933
Hebeloma cylindrosporum
M413DRAFT_440933
I
PHLGIDRAFT_68835
Phlebiopsis gigantea
PHLGIDRAFT_68835
I