neurod1 (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000019566 T033653_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.894 0.942
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.894 0.942
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.894 0.942
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.894 0.942
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.894 0.942
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.894 0.942
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.894 0.942
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.894 0.942
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.859 0.904
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.859 0.904
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.859 0.904
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.859 0.904
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.859 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000026490 bHLH 97 149
ENSDARP00000132736 bHLH 97 149

Links

Other bHLH family TFs
Other Danio rerio TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BDDG_09840 Blastomyces dermatitidis BDDG_09840 N 0.000
ACLA_098580 Aspergillus clavatus CADACLAG00009113 N 0.000
AFUA_6G01960 Aspergillus fumigatus CADAFUAG00000662 N 0.000
CADANGAG00010337 Aspergillus niger CADANGAG00010337 N 0.000
ANIA_08666 Aspergillus nidulans CADANIAG00006379 N 0.000
ATEG_07265 Aspergillus terreus CADATEAG00003627 N 0.000
NFIA_048150 Neosartorya fischeri CADNFIAG00004366 N 0.000
CIMG_09999 Coccidioides immitis CIMG_09999 N 0.000
CPC735_011650 Coccidioides posadasii CPC735_011650 N 0.000
EURHEDRAFT_460941 Aspergillus ruber EURHEDRAFT_460941 N 0.000
e_gw1.00169.1.1 Aspergillus carbonarius e_gw1.00169.1.1 N 0.000
H102_08817 Trichophyton rubrum H102_08817 N 0.000
H105_08842 Trichophyton soudanense H105_08842 N 0.000
HCBG_02942 Histoplasma capsulatum HCBG_02942 N 0.000
MCYG_02975 Microsporum canis MCYG_02975 N 0.000
MCYG_02975 Arthroderma otae MCYG_02975 N 0.000
PAAG_04477 Paracoccidioides sp lutzii PAAG_04477 N 0.000
PABG_04267 Paracoccidioides brasiliensis PABG_04267 N 0.000
Pc22g24500 Penicillium chrysogenum Pc22g24500 N 0.000
PCH_Pc22g24500 Penicillium rubens PCH_Pc22g24500 N 0.000
PITC_054260 Penicillium italicum PITC_054260 N 0.000
PMAA_093440 Talaromyces marneffei PMAA_093440 N 0.000
PMAA_093440 Penicillium marneffei PMAA_093440 N 0.000
PVAR5_7535 Byssochlamys spectabilis PVAR5_7535 N 0.000
TEQG_06658 Trichophyton equinum TEQG_06658 N 0.000
TSTA_047890 Talaromyces stipitatus TSTA_047890 N 0.000
U727_00431231441 Penicillium solitum U727_00431231441 N 0.000
UREG_06021 Uncinocarpus reesii UREG_06021 N 0.000
W97_05488 Coniosporium apollinis W97_05488 N 0.000