CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
USF2
(
Dasypus novemcinctus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSDNOG00000003072
T033755_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
USF2
M04076_2.00
Homo sapiens
NVCACGTGVCN
NGBCACGTGBN
SELEX
Yin et al.(2017)
USF2_eDBD_HT-SELEX
0.914
1.000
USF2
M08050_2.00
Homo sapiens
NNVYCACGTGACHNNN
NNNDGTCACGTGRBNN
ChIP-seq
Mathelier et al.(2014)
MA0526.2
0.914
1.000
USF2
M07785_2.00
Homo sapiens
NGTCACGTGRBSVVV
BBBSVYCACGTGACN
ChIP-seq
Gerstein et al.(2012)
GM12878_USF2_Stanford
0.914
1.000
USF2
M07786_2.00
Homo sapiens
NVGTCACGTGRBSVVV
BBBSVYCACGTGACBN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF2_Stanford
0.914
1.000
USF2
M07787_2.00
Homo sapiens
RGTCACGTGVB
VBCACGTGACY
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_USF2_Stanford
0.914
1.000
USF2
M07788_2.00
Homo sapiens
NGTCACGTGRBSV
BSVYCACGTGACN
ChIP-seq
Gerstein et al.(2012)
HepG2_USF2_Stanford
0.914
1.000
USF2
M07789_2.00
Homo sapiens
RGTCACGTGRBSV
BSVYCACGTGACY
ChIP-seq
Gerstein et al.(2012)
K562_USF2_Stanford
0.914
1.000
USF2
M08715_2.00
Homo sapiens
NVGTCACGTGVBSVNNVNB
VNBNNBSVBCACGTGACBN
Misc
Kulakovskiy et al.(2013)
USF2_HUMAN.H11MO.0.A
0.914
1.000
USF2
M09812_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$USF2_01
0.914
1.000
USF2
M09813_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$USF2_02
0.914
1.000
USF2
M09814_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$USF2_Q6_01
0.914
1.000
USF2
M09815_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$USF2_Q6
0.914
1.000
USF2
M04077_2.00
Homo sapiens
VNCAYGTGACN
NGTCACRTGNB
SELEX
Yin et al.(2017)
USF2_eDBD_Methyl-HT-SELEX
0.914
1.000
Usf2
M01752_2.00
Mus musculus
NNCACGTGAN
NTCACGTGNN
PBM
Weirauch et al.(2014)
pTH5265
0.871
0.981
Usf2
M08777_2.00
Mus musculus
NVGTCACGTGVBSVNNVNB
VNBNNBSVBCACGTGACBN
Misc
Kulakovskiy et al.(2013)
USF2_MOUSE.H11MO.0.A
0.871
0.981
Usf2
M09479_2.00
Mus musculus
NNCAYGTGVY
RBCACRTGNN
Misc
Heinz et al.(2010)
C2C12-Usf2_GSE36030
0.871
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000002377
bHLH
161
216
RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR
Links
Other
bHLH
family TFs
Other
Dasypus novemcinctus
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CY34DRAFT_796967
Suillus luteus
CY34DRAFT_796967
N
GLOTRDRAFT_135627
Gloeophyllum trabeum
GLOTRDRAFT_135627
N
JAAARDRAFT_37988
Jaapia argillacea
JAAARDRAFT_37988
N
M378DRAFT_33641
Amanita muscaria
M378DRAFT_33641
N
M404DRAFT_1002423
Pisolithus tinctorius
M404DRAFT_1002423
N
PAXRUDRAFT_697793
Paxillus rubicundulus
PAXRUDRAFT_697793
N
PILCRDRAFT_817486
Piloderma croceum
PILCRDRAFT_817486
N
PISMIDRAFT_8901
Pisolithus microcarpus
PISMIDRAFT_8901
N
SCLCIDRAFT_1210457
Scleroderma citrinum
SCLCIDRAFT_1210457
N
SERLA73DRAFT_161809
Serpula lacrymans
SERLA73DRAFT_161809
N