CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSDORG00000012142
(
Dipodomys ordii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSDORG00000012142
T033886_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.914
1.000
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.914
1.000
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.914
1.000
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.914
1.000
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.914
1.000
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.914
1.000
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.914
1.000
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.914
1.000
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.879
0.962
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.879
0.962
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.879
0.962
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.879
0.962
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.879
0.962
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000011416
bHLH
102
154
RRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
Links
Other
bHLH
family TFs
Other
Dipodomys ordii
TFs
269 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01165
Capronia coronata
A1O1_01165
I
A1O3_08745
Capronia epimyces
A1O3_08745
I
A1O5_00463
Cladophialophora psammophila
A1O5_00463
I
A1O7_01320
Cladophialophora yegresii
A1O7_01320
I
A1O9_00176
Exophiala aquamarina
A1O9_00176
I
AB00812.1
Alternaria brassicicola
AB00812.1
I
ACRE_039490
Acremonium chrysogenum
ACRE_039490
I
AGABI2DRAFT_177253
Agaricus bisporus
AGABI2DRAFT_177253
I
AMAG_00738
Allomyces macrogynus
AMAG_00738
I
AMAG_02241
Allomyces macrogynus
AMAG_02241
I
AMAG_02657
Allomyces macrogynus
AMAG_02657
I
AMAG_17764
Allomyces macrogynus
AMAG_17764
I
AOL_s00075g211
Arthrobotrys oligospora
AOL_s00075g211
I
AUEXF2481DRAFT_721
Aureobasidium subglaciale
AUEXF2481DRAFT_721
I
BAUCODRAFT_64949
Baudoinia compniacensis
BAUCODRAFT_64949
I
BBA_06064
Beauveria bassiana
BBA_06064
I
BBA_09441
Beauveria bassiana
BBA_09441
I
BBA_09560
Beauveria bassiana
BBA_09560
I
BBA_10233
Beauveria bassiana
BBA_10233
I
BBA_10253
Beauveria bassiana
BBA_10253
I
Bcin14g03930
Botrytis cinerea
Bcin14g03930
I
BDDG_01688
Blastomyces dermatitidis
BDDG_01688
I
BGHDH14_bgh03088
Blumeria graminis
BGHDH14_bgh03088
I
BN946_scf184754.g8
Trametes cinnabarina
BN946_scf184754.g8
I
BOTBODRAFT_149615
Botryobasidium botryosum
BOTBODRAFT_149615
I
ACLA_041500
Aspergillus clavatus
CADACLAG00003643
I
CADAFLAG00003906
Aspergillus flavus
CADAFLAG00003906
I
AFUA_3G13870
Aspergillus fumigatus
CADAFUAG00005882
I
CADANGAG00002477
Aspergillus niger
CADANGAG00002477
I
nsdD
Aspergillus nidulans
CADANIAG00009919
I
CADAORAG00006305
Aspergillus oryzae
CADAORAG00006305
I
ATEG_04043
Aspergillus terreus
CADATEAG00009213
I
NFIA_063400
Neosartorya fischeri
CADNFIAG00005846
I
CANTEDRAFT_91588
Candida tenuis
CANTEDRAFT_91588
I
CC1G_06265
Coprinopsis cinerea
CC1G_06265
I
CCM_00560
Cordyceps militaris
CCM_00560
I
CERSUDRAFT_117427
Ceriporiopsis subvermispora
CERSUDRAFT_117427
I
CFIO01_13220
Colletotrichum fioriniae
CFIO01_13220
I
CGGC5_6860
Colletotrichum gloeosporioides
CGGC5_6860
I
CH063_11622
Colletotrichum higginsianum
CH063_11622
I
CIMG_00087
Coccidioides immitis
CIMG_00087
I
COCMIDRAFT_31652
Bipolaris oryzae
COCMIDRAFT_31652
I
COCSADRAFT_262372
Bipolaris sorokiniana
COCSADRAFT_262372
I
COCVIDRAFT_32829
Bipolaris victoriae
COCVIDRAFT_32829
I
CPC735_060480
Coccidioides posadasii
CPC735_060480
I
CSUB01_03231
Colletotrichum sublineola
CSUB01_03231
I
CTHT_0052380
Chaetomium thermophilum
CTHT_0052380
I
DACRYDRAFT_47643
Dacryopinax sp
DACRYDRAFT_47643
I
DEHA2F25916g
Debaryomyces hansenii
DEHA2F25916g
I
DOTSEDRAFT_68310
Dothistroma septosporum
DOTSEDRAFT_68310
I
DRE_04106
Drechslerella stenobrocha
DRE_04106
I
EDP42063.1
Malassezia globosa
EDP42063.1
I
EPUS_00825
Endocarpon pusillum
EPUS_00825
I
estExt_fgenesh1_pg.C_10665
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_10665
I
estExt_fgenesh1_pg.C_chr_11429
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_11429
I
estExt_fgenesh1_pm.C_10224
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_10224
I
estExt_fgenesh1_pm.C_sca_5_chr5_3_00060
Nectria haematococca
estExt_fgenesh1_pm.C_sca_5_chr5_3_00060
I
estExt_fgenesh3_kg.C_140077
Neurospora discreta
estExt_fgenesh3_kg.C_140077
I
estExt_fgeneshMC_kg.C_30209
Mucor circinelloides
estExt_fgeneshMC_kg.C_30209
I
estExt_fgeneshMC_kg.C_30237
Mucor circinelloides
estExt_fgeneshMC_kg.C_30237
I
estExt_fgeneshMC_pg.C_50482
Mucor circinelloides
estExt_fgeneshMC_pg.C_50482
I
estExt_fgeneshPB_pg.C_70124
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_70124
I
estExt_Genewise1Plus.C_70696
Cryphonectria parasitica
estExt_Genewise1Plus.C_70696
I
EuGene17000025
Heterobasidion annosum
EuGene17000025
I
EURHEDRAFT_464468
Aspergillus ruber
EURHEDRAFT_464468
I
EV44_g2708
Erysiphe necator
EV44_g2708
I
F503_08730
Ophiostoma piceae uamh
F503_08730
I
FFUJ_07383
Fusarium fujikuroi
FFUJ_07383
I
fgenesh1_pg.00866_#_575
Aspergillus carbonarius
fgenesh1_pg.00866_#_575
I
fgenesh1_pg.C_scaffold_4000132
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000132
I
fgenesh1_pg.sca_83_unmapped000003
Nectria haematococca
fgenesh1_pg.sca_83_unmapped000003
I
fgeneshPB_pg.14__263
Phycomyces blakesleeanus
fgeneshPB_pg.14__263
I
fgeneshPB_pg.2__705
Phycomyces blakesleeanus
fgeneshPB_pg.2__705
I
FGRRES_17300
Fusarium graminearum
FGRRES_17300
I
FIBRA_03562
Fibroporia radiculosa
FIBRA_03562
I
FOMPIDRAFT_133363
Fomitopsis pinicola
FOMPIDRAFT_133363
I
FOXG_05342
Fusarium oxysporum
FOXG_05342
I
FOXG_14975
Fusarium oxysporum
FOXG_14975
I
G647_01386
Cladophialophora carrionii
G647_01386
I
GALMADRAFT_118587
Galerina marginata
GALMADRAFT_118587
I
GGTG_07031
Gaeumannomyces graminis
GGTG_07031
I
GLOINDRAFT_181922
Rhizophagus irregularis
GLOINDRAFT_181922
I
GLOINDRAFT_343272
Rhizophagus irregularis
GLOINDRAFT_343272
I
GLOINDRAFT_349729
Rhizophagus irregularis
GLOINDRAFT_349729
I
GLOTRDRAFT_140412
Gloeophyllum trabeum
GLOTRDRAFT_140412
I
GLRG_03333
Colletotrichum graminicola
GLRG_03333
I
GMDG_08277
Pseudogymnoascus destructans
GMDG_08277
I
GYMLUDRAFT_48090
Gymnopus luxurians
GYMLUDRAFT_48090
I
H072_763
Dactylellina haptotyla
H072_763
I
H101_07383
Trichophyton interdigitale
H101_07383
I
H102_08281
Trichophyton rubrum
H102_08281
I
H105_08310
Trichophyton soudanense
H105_08310
I
HCBG_05204
Histoplasma capsulatum
HCBG_05204
I
HETIRDRAFT_247589
Heterobasidion irregulare
HETIRDRAFT_247589
I
HMPREF1120_00248
Exophiala dermatitidis
HMPREF1120_00248
I
HMPREF1541_06379
Cyphellophora europaea
HMPREF1541_06379
I
HMPREF1624_00018
Sporothrix schenckii
HMPREF1624_00018
I
HYDPIDRAFT_30042
Hydnomerulius pinastri
HYDPIDRAFT_30042
I
JAAARDRAFT_72689
Jaapia argillacea
JAAARDRAFT_72689
I
K443DRAFT_142600
Laccaria amethystina
K443DRAFT_142600
I
KLTH0E09548g
Lachancea thermotolerans
KLTH0E09548g
I
KLTH0E09548g
Kluyveromyces thermotolerans
KLTH0E09548g
I
LACBIDRAFT_297200
Laccaria bicolor
LACBIDRAFT_297200
I
LEMA_P078810.1
Leptosphaeria maculans
LEMA_P078810.1
I
M378DRAFT_170228
Amanita muscaria
M378DRAFT_170228
I
M404DRAFT_991532
Pisolithus tinctorius
M404DRAFT_991532
I
M407DRAFT_63874
Tulasnella calospora
M407DRAFT_63874
I
M437DRAFT_55951
Aureobasidium melanogenum
M437DRAFT_55951
I
M438DRAFT_352549
Aureobasidium pullulans
M438DRAFT_352549
I
MAC_01133
Metarhizium acridum
MAC_01133
I
MAJ_03944
Metarhizium majus
MAJ_03944
I
MAM_07861
Metarhizium album
MAM_07861
I
MANI_023659
Metarhizium anisopliae
MANI_023659
I
MAPG_05772
Magnaporthe poae
MAPG_05772
I
MBR_01569
Metarhizium brunneum
MBR_01569
I
MCYG_00112
Microsporum canis
MCYG_00112
I
MCYG_00112
Arthroderma otae
MCYG_00112
I
MGG_07319
Magnaporthe oryzae
MGG_07319
I
MGU_02247
Metarhizium guizhouense
MGU_02247
I
MGYG_00673
Microsporum gypseum
MGYG_00673
I
Moror_3883
Moniliophthora roreri
Moror_3883
I
MPER_15845
Moniliophthora perniciosa
MPER_15845
I
MPH_02070
Macrophomina phaseolina
MPH_02070
I
MYCFIDRAFT_85908
Pseudocercospora fijiensis
MYCFIDRAFT_85908
I
Mycgr3G107643
Zymoseptoria tritici
Mycgr3G107643
I
NCAS_0D01260
Naumovozyma castellii
NCAS_0D01260
I
sub-1
Neurospora crassa
NCU01154
D
NechaG104418
Fusarium solani
NechaG104418
I
NechaG88991
Fusarium solani
NechaG88991
I
NEUTE1DRAFT_127702
Neurospora tetrasperma
NEUTE1DRAFT_127702
I
OCS_03409
Ophiocordyceps sinensis
OCS_03409
I
OIDMADRAFT_154229
Oidiodendron maius
OIDMADRAFT_154229
I
PAAG_05818
Paracoccidioides sp lutzii
PAAG_05818
I
PABG_05830
Paracoccidioides brasiliensis
PABG_05830
I
PAN0_015c5180
Pseudozyma antarctica
PAN0_015c5180
I
PAXINDRAFT_134989
Paxillus involutus
PAXINDRAFT_134989
I
PAXRUDRAFT_92867
Paxillus rubicundulus
PAXRUDRAFT_92867
I
Pc13g15350
Penicillium chrysogenum
Pc13g15350
I
Pc21g03670
Penicillium chrysogenum
Pc21g03670
I
PCH_Pc13g15350
Penicillium rubens
PCH_Pc13g15350
I
PCH_Pc21g03670
Penicillium rubens
PCH_Pc21g03670
I
PDE_02029
Penicillium oxalicum
PDE_02029
I
PDIP_24050
Penicillium digitatum
PDIP_24050
I
PEX1_036690
Penicillium expansum
PEX1_036690
I
PFICI_13402
Pestalotiopsis fici
PFICI_13402
I
PFL1_04652
Pseudozyma flocculosa
PFL1_04652
I
PHACADRAFT_252970
Phanerochaete carnosa
PHACADRAFT_252970
I
PHLGIDRAFT_130107
Phlebiopsis gigantea
PHLGIDRAFT_130107
I
PHSY_002311
Pseudozyma hubeiensis
PHSY_002311
I
PIIN_03483
Piriformospora indica
PIIN_03483
I
PIIN_05533
Piriformospora indica
PIIN_05533
I
PILCRDRAFT_817785
Piloderma croceum
PILCRDRAFT_817785
I
PISMIDRAFT_27336
Pisolithus microcarpus
PISMIDRAFT_27336
I
PITC_039600
Penicillium italicum
PITC_039600
I
PLEOSDRAFT_1094410
Pleurotus ostreatus
PLEOSDRAFT_1094410
I
PLICRDRAFT_701268
Plicaturopsis crispa
PLICRDRAFT_701268
I
PMAA_019060
Talaromyces marneffei
PMAA_019060
I
PMAA_019060
Penicillium marneffei
PMAA_019060
I
PODANS_2_1880
Podospora anserina
PODANS_2_1880
I
PSEUBRA_SCAF18g04670
Pseudozyma brasiliensis
PSEUBRA_SCAF18g04670
I
PTT_12856
Pyrenophora teres
PTT_12856
I
PV04_00647
Capronia semiimmersa
PV04_00647
I
PV05_01900
Exophiala xenobiotica
PV05_01900
I
PV06_06115
Exophiala oligosperma
PV06_06115
I
PV07_05919
Cladophialophora immunda
PV07_05919
I
PV08_04845
Exophiala spinifera
PV08_04845
I
PV09_05321
Verruconis gallopava
PV09_05321
I
PV10_02392
Exophiala mesophila
PV10_02392
I
PV11_10134
Exophiala sideris
PV11_10134
I
PVAR5_3263
Byssochlamys spectabilis
PVAR5_3263
I
RO3G_03309
Rhizopus oryzae
RO3G_03309
I
RO3G_15967
Rhizopus oryzae
RO3G_15967
I
S40285_04108
Stachybotrys chlorohalonata
S40285_04108
I
S40288_07636
Stachybotrys chartarum
S40288_07636
I
SCHCODRAFT_108660
Schizophyllum commune
SCHCODRAFT_108660
I
SCLCIDRAFT_10458
Scleroderma citrinum
SCLCIDRAFT_10458
I
SEPMUDRAFT_78069
Sphaerulina musiva
SEPMUDRAFT_78069
I
SERLA73DRAFT_160841
Serpula lacrymans
SERLA73DRAFT_160841
I
SMAC_03223
Sordaria macrospora
SMAC_03223
I
SNOG_10431
Stagonospora nodorum
SNOG_10431
I
sr16104
Sporisorium reilianum
sr16104
I
TEQG_01014
Trichophyton equinum
TEQG_01014
I
TESG_04545
Trichophyton tonsurans
TESG_04545
I
THITE_2106568
Thielavia terrestris
THITE_2106568
I
TRIATDRAFT_258818
Trichoderma atroviride
TRIATDRAFT_258818
I
TRIREDRAFT_57735
Trichoderma reesei
TRIREDRAFT_57735
I
TRIVIDRAFT_214458
Trichoderma virens
TRIVIDRAFT_214458
I
TSTA_027060
Talaromyces stipitatus
TSTA_027060
I
U727_00433161111
Penicillium solitum
U727_00433161111
I
UHOR_07508
Ustilago hordei
UHOR_07508
I
UM05773
Ustilago maydis
UM05773
I
V499_02833
Pseudogymnoascus pannorum
V499_02833
I
V565_040510
Rhizoctonia solani
V565_040510
I
V565_084370
Rhizoctonia solani
V565_084370
I
V565_302880
Rhizoctonia solani
V565_302880
I
VDBG_00527
Verticillium albo atrum
VDBG_00527
I
VDBG_00527
Verticillium alfalfae
VDBG_00527
I
VHEMI00246
Torrubiella hemipterigena
VHEMI00246
I
VHEMI08657
Torrubiella hemipterigena
VHEMI08657
I
W97_08308
Coniosporium apollinis
W97_08308
I
X797_002080
Metarhizium robertsii
X797_002080
I
Z517_07105
Fonsecaea pedrosoi
Z517_07105
I
Z518_02217
Rhinocladiella mackenziei
Z518_02217
I
Z519_00470
Cladophialophora bantiana
Z519_00470
I