NPAS2 (Echinops telfairi)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSETEG00000008221 T034049_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Npas2
M01731_2.00 		Mus musculus
NVCACGTGBN
NVCACGTGBN		 PBM
Weirauch et al.(2014)
pTH5457 		0.914 0.980
NPAS2
M04158_2.00 		Homo sapiens
NRCACGTGKH
DMCACGTGYN		 SELEX
Yin et al.(2017)
NPAS2_eDBD_HT-SELEX 		0.914 0.980
Npas2
M09468_2.00 		Mus musculus
VKCACRTGKM
KMCAYGTGMB		 Misc
Heinz et al.(2010)
Liver-NPAS2_GSE39860 		0.914 0.980
NPAS2
M04159_2.00 		Homo sapiens
DVCRCRTGKH
DMCAYGYGBH		 SELEX
Yin et al.(2017)
NPAS2_eDBD_Methyl-HT-SELEX 		0.914 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000006682 bHLH 10 59

Links

Other bHLH family TFs
Other Echinops telfairi TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29562.m000029 Ricinus communis 29562.m000029 N
30170.m013668 Ricinus communis 30170.m013668 N
BGIOSGA023403 Oryza indica BGIOSGA023403 N
GLYMA18G29400 Glycine max GLYMA18G29400 I
Gorai.001G140000 Gossypium raimondii Gorai.001G140000 I
Gorai.004G263900 Gossypium raimondii Gorai.004G263900 I
GRMZM2G008234 Zea mays GRMZM2G008234 N
GRMZM2G021573 Zea mays GRMZM2G021573 I
GRMZM2G028151 Zea mays GRMZM2G028151 I
LjSGA_007141.1 Lotus japonicus LjSGA_007141.1 N
LjSGA_008808.1 Lotus japonicus LjSGA_008808.1 N
Lus10011731.g Linum usitatissimum Lus10011731.g N
Lus10015653.g Linum usitatissimum Lus10015653.g N
MDP0000825712 Malus domestica MDP0000825712 N
MLOC_10221 Hordeum vulgare MLOC_10221 I
MLOC_51604 Hordeum vulgare MLOC_51604 N
MLOC_70754 Hordeum vulgare MLOC_70754 I
MLOC_70927 Hordeum vulgare MLOC_70927 N
OB01G49350 Oryza brachyantha OB01G49350 N
OB03G24880 Oryza brachyantha OB03G24880 N
OBART04G17940 Oryza barthii OBART04G17940 N
OBART04G27840 Oryza barthii OBART04G27840 N
OLONG_000238 Oryza longistaminata OLONG_000238 N
OLONG_004616 Oryza longistaminata OLONG_004616 N
ONIVA04G16290 Oryza nivara ONIVA04G16290 N
ORUFI06G25070 Oryza rufipogon ORUFI06G25070 N
OS02G0614300 Oryza sativa OS02G0614300 N
PDK_20s1310831g003 Phoenix dactylifera PDK_20s1310831g003 N
PGSC0003DMG400014598 Solanum tuberosum PGSC0003DMG400014598 N
PGSC0003DMG401009171 Solanum tuberosum PGSC0003DMG401009171 N
TCM_025083 Theobroma cacao TCM_025083 N
Thhalv10011985m.g Eutrema salsugineum Thhalv10011985m.g N
Traes_3AL_7ECC5258D Triticum aestivum Traes_3AL_7ECC5258D N
Traes_3DL_83B339561 Triticum aestivum Traes_3DL_83B339561 N
Traes_4BL_21E038CCB Triticum aestivum Traes_4BL_21E038CCB N
Traes_4DL_A739DE8B2 Triticum aestivum Traes_4DL_A739DE8B2 N
Traes_7AL_C5F8733D0 Triticum aestivum Traes_7AL_C5F8733D0 N
Traes_7BL_9FED7F55E Triticum aestivum Traes_7BL_9FED7F55E N
Traes_7DL_FBE71A7AE Triticum aestivum Traes_7DL_FBE71A7AE N
VIT_04s0023g00970 Vitis vinifera VIT_04s0023g00970 N