CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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msgn1
(
Gasterosteus aculeatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGACG00000008865
T034413_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000011697
bHLH
78
132
RRMKASEREKMRMRSLAEALHHLRDYLPPDYSRRGQPLTKIQTLKYTIEYINKLS
Links
Other
bHLH
family TFs
Other
Gasterosteus aculeatus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000026090
Astyanax mexicanus
ENSAMXG00000026090
N
0.886
msgn1
Danio rerio
ENSDARG00000070546
N
0.867
msgn1
Gasterosteus aculeatus
ENSGACG00000008864
N
0.914
ENSLOCG00000017878
Lepisosteus oculatus
ENSLOCG00000017878
I
0.868
ENSONIG00000013311
Oreochromis niloticus
ENSONIG00000013311
N
0.865
msgn1
Oryzias latipes
ENSORLG00000014828
N
0.846
ENSPFOG00000020615
Poecilia formosa
ENSPFOG00000020615
N
0.889
msgn1
Tetraodon nigroviridis
ENSTNIG00000001511
N
0.861
msgn1
Takifugu rubripes
ENSTRUG00000008888
N
0.889
ENSXMAG00000020371
Xiphophorus maculatus
ENSXMAG00000020371
N
0.889
Ogr03919
Ophisaurus gracilis
Ogr03919
I
0.865