CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEUROD2
(
Gorilla gorilla
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGGOG00000000493
T034558_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.914
1.000
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.914
1.000
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.914
1.000
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.914
1.000
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.914
1.000
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.879
0.962
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.879
0.962
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.879
0.962
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.879
0.962
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.879
0.962
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.879
0.962
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.879
0.962
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.879
0.962
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000000485
bHLH
122
174
RRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
ENSGGOP00000026327
bHLH
104
156
RRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
Links
Other
bHLH
family TFs
Other
Gorilla gorilla
TFs
266 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_122840
Agaricus bisporus
AGABI2DRAFT_122840
N
BOTBODRAFT_173998
Botryobasidium botryosum
BOTBODRAFT_173998
N
CC1G_12253
Coprinopsis cinerea
CC1G_12253
N
CY34DRAFT_41394
Suillus luteus
CY34DRAFT_41394
N
DICSQDRAFT_15457
Dichomitus squalens
DICSQDRAFT_15457
N
fgenesh1_pg.C_scaffold_27000033
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_27000033
N
FOMPIDRAFT_31533
Fomitopsis pinicola
FOMPIDRAFT_31533
N
GALMADRAFT_262763
Galerina marginata
GALMADRAFT_262763
N
gw1.4.1016.1
Heterobasidion annosum
gw1.4.1016.1
N
HETIRDRAFT_18789
Heterobasidion irregulare
HETIRDRAFT_18789
N
JAAARDRAFT_27573
Jaapia argillacea
JAAARDRAFT_27573
N
K443DRAFT_677044
Laccaria amethystina
K443DRAFT_677044
N
LACBIDRAFT_296037
Laccaria bicolor
LACBIDRAFT_296037
N
M378DRAFT_194259
Amanita muscaria
M378DRAFT_194259
N
M404DRAFT_1000446
Pisolithus tinctorius
M404DRAFT_1000446
N
M413DRAFT_447606
Hebeloma cylindrosporum
M413DRAFT_447606
N
Moror_5777
Moniliophthora roreri
Moror_5777
N
MPER_08759
Moniliophthora perniciosa
MPER_08759
N
PAXRUDRAFT_826503
Paxillus rubicundulus
PAXRUDRAFT_826503
N
PHACADRAFT_251015
Phanerochaete carnosa
PHACADRAFT_251015
N
PILCRDRAFT_596287
Piloderma croceum
PILCRDRAFT_596287
N
PISMIDRAFT_36525
Pisolithus microcarpus
PISMIDRAFT_36525
N
PLEOSDRAFT_9817
Pleurotus ostreatus
PLEOSDRAFT_9817
N
POSPLDRAFT_93658
Postia placenta
POSPLDRAFT_93658
N
SCLCIDRAFT_94331
Scleroderma citrinum
SCLCIDRAFT_94331
N