CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NEUROD6
(
Meleagris gallopavo
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMGAG00000012144
T035209_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.894
0.942
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.894
0.942
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.894
0.942
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.894
0.942
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.894
0.942
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.894
0.942
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.894
0.942
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.894
0.942
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.859
0.942
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.859
0.942
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.859
0.942
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.859
0.942
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.859
0.942
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000012754
bHLH
95
147
RRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
Links
Other
bHLH
family TFs
Other
Meleagris gallopavo
TFs
270 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_00801
Capronia coronata
A1O1_00801
I
0.000
A1O1_02509
Capronia coronata
A1O1_02509
N
0.000
A1O3_00914
Capronia epimyces
A1O3_00914
N
0.000
A1O3_02841
Capronia epimyces
A1O3_02841
I
0.000
A1O5_01498
Cladophialophora psammophila
A1O5_01498
N
0.000
A1O7_04026
Cladophialophora yegresii
A1O7_04026
I
0.000
A1O7_08287
Cladophialophora yegresii
A1O7_08287
N
0.000
AOL_s00215g416
Arthrobotrys oligospora
AOL_s00215g416
N
0.000
ARB_01120
Arthroderma benhamiae
ARB_01120
N
0.000
AUEXF2481DRAFT_65216
Aureobasidium subglaciale
AUEXF2481DRAFT_65216
N
0.000
Bcin07g06120
Botrytis cinerea
Bcin07g06120
N
0.000
BDDG_08162
Blastomyces dermatitidis
BDDG_08162
N
0.000
ACLA_007650
Aspergillus clavatus
CADACLAG00000450
N
0.000
CADAFLAG00000474
Aspergillus flavus
CADAFLAG00000474
N
0.000
AFUA_7G05960
Aspergillus fumigatus
CADAFUAG00009660
N
0.000
CADANGAG00005435
Aspergillus niger
CADANGAG00005435
N
0.000
ANIA_06733
Aspergillus nidulans
CADANIAG00007526
N
0.000
CADAORAG00002457
Aspergillus oryzae
CADAORAG00002457
N
0.000
NFIA_027200
Neosartorya fischeri
CADNFIAG00002534
N
0.000
CIMG_08163
Coccidioides immitis
CIMG_08163
N
0.000
COCC4DRAFT_202082
Bipolaris maydis
COCC4DRAFT_202082
N
0.000
COCCADRAFT_88010
Bipolaris zeicola
COCCADRAFT_88010
N
0.000
COCMIDRAFT_98420
Bipolaris oryzae
COCMIDRAFT_98420
N
0.000
COCSADRAFT_314350
Bipolaris sorokiniana
COCSADRAFT_314350
N
0.000
COCVIDRAFT_111354
Bipolaris victoriae
COCVIDRAFT_111354
N
0.000
CPC735_021860
Coccidioides posadasii
CPC735_021860
N
0.000
DOTSEDRAFT_75761
Dothistroma septosporum
DOTSEDRAFT_75761
N
0.000
EPUS_02224
Endocarpon pusillum
EPUS_02224
N
0.000
estExt_Genewise1Plus.C_230145
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_230145
N
0.000
EURHEDRAFT_512897
Aspergillus ruber
EURHEDRAFT_512897
N
0.000
fgenesh1_pm.00771_#_78
Aspergillus carbonarius
fgenesh1_pm.00771_#_78
N
0.000
G647_04666
Cladophialophora carrionii
G647_04666
I
0.000
G647_07244
Cladophialophora carrionii
G647_07244
N
0.000
GMDG_04017
Pseudogymnoascus destructans
GMDG_04017
I
0.000
GSTUM_00002483001
Tuber melanosporum
GSTUM_00002483001
N
0.000
H072_9547
Dactylellina haptotyla
H072_9547
N
0.000
H101_04104
Trichophyton interdigitale
H101_04104
N
0.000
H102_03320
Trichophyton rubrum
H102_03320
N
0.000
H105_03339
Trichophyton soudanense
H105_03339
N
0.000
HMPREF1120_02238
Exophiala dermatitidis
HMPREF1120_02238
N
0.000
HMPREF1541_03654
Cyphellophora europaea
HMPREF1541_03654
N
0.000
HMPREF1541_09227
Cyphellophora europaea
HMPREF1541_09227
N
0.000
LEMA_P059350.1
Leptosphaeria maculans
LEMA_P059350.1
N
0.000
M438DRAFT_383887
Aureobasidium pullulans
M438DRAFT_383887
N
0.000
MBM_01735
Marssonina brunnea
MBM_01735
I
0.000
MCYG_02260
Arthroderma otae
MCYG_02260
N
0.000
MCYG_02260
Microsporum canis
MCYG_02260
N
0.000
MGG_01776
Magnaporthe oryzae
MGG_01776
I
0.000
MGYG_07575
Microsporum gypseum
MGYG_07575
N
0.000
MPH_07157
Macrophomina phaseolina
MPH_07157
N
0.000
OIDMADRAFT_140709
Oidiodendron maius
OIDMADRAFT_140709
I
0.000
PAAG_03715
Paracoccidioides sp lutzii
PAAG_03715
N
0.000
PABG_00768
Paracoccidioides brasiliensis
PABG_00768
N
0.000
Pc20g01360
Penicillium chrysogenum
Pc20g01360
N
0.000
PCH_Pc20g01360
Penicillium rubens
PCH_Pc20g01360
N
0.000
PDE_02184
Penicillium oxalicum
PDE_02184
N
0.000
PDIP_22920
Penicillium digitatum
PDIP_22920
N
0.000
PEX1_025390
Penicillium expansum
PEX1_025390
N
0.000
PITC_029080
Penicillium italicum
PITC_029080
N
0.000
PMAA_049200
Penicillium marneffei
PMAA_049200
N
0.000
PMAA_049200
Talaromyces marneffei
PMAA_049200
N
0.000
PTRG_11331
Pyrenophora triticirepentis
PTRG_11331
N
0.000
PTT_14634
Pyrenophora teres
PTT_14634
N
0.000
PV04_05279
Capronia semiimmersa
PV04_05279
I
0.000
PV04_08823
Capronia semiimmersa
PV04_08823
N
0.000
PV05_00997
Exophiala xenobiotica
PV05_00997
N
0.000
PV05_01304
Exophiala xenobiotica
PV05_01304
N
0.000
PV06_09822
Exophiala oligosperma
PV06_09822
N
0.000
PV07_00882
Cladophialophora immunda
PV07_00882
N
0.000
PV08_08880
Exophiala spinifera
PV08_08880
N
0.000
PV09_03074
Verruconis gallopava
PV09_03074
N
0.000
PV10_00514
Exophiala mesophila
PV10_00514
I
0.000
PV10_04925
Exophiala mesophila
PV10_04925
N
0.000
PV11_02484
Exophiala sideris
PV11_02484
N
0.000
PVAR5_4548
Byssochlamys spectabilis
PVAR5_4548
N
0.000
SETTUDRAFT_164235
Setosphaeria turcica
SETTUDRAFT_164235
N
0.000
SNOG_12578
Phaeosphaeria nodorum
SNOG_12578
N
0.000
SNOG_12578
Stagonospora nodorum
SNOG_12578
N
0.000
TEQG_07260
Trichophyton equinum
TEQG_07260
N
0.000
TESG_03991
Trichophyton tonsurans
TESG_03991
N
0.000
TRIREDRAFT_25244
Trichoderma reesei
TRIREDRAFT_25244
N
0.000
TRIVIDRAFT_113002
Trichoderma virens
TRIVIDRAFT_113002
N
0.000
TRV_02239
Trichophyton verrucosum
TRV_02239
N
0.000
TSTA_039140
Talaromyces stipitatus
TSTA_039140
N
0.000
U727_00431380241
Penicillium solitum
U727_00431380241
N
0.000
UREG_02425
Uncinocarpus reesii
UREG_02425
N
0.000
V499_02646
Pseudogymnoascus pannorum
V499_02646
I
0.000
VHEMI03655
Torrubiella hemipterigena
VHEMI03655
N
0.000
W97_07490
Coniosporium apollinis
W97_07490
N
0.000
Z517_05164
Fonsecaea pedrosoi
Z517_05164
N
0.000
Z517_11712
Fonsecaea pedrosoi
Z517_11712
I
0.000
Z518_10184
Rhinocladiella mackenziei
Z518_10184
I
0.000
Z518_10852
Rhinocladiella mackenziei
Z518_10852
N
0.000
Z519_01916
Cladophialophora bantiana
Z519_01916
N
0.000