CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TCF3 *(Myotis lucifugus)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSMLUG00000011221	T035336_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TCF3 M02775_2.00	Homo sapiens	NVCACCTGBN	NVCAGGTGBN	SELEX Jolma et al.(2013) TCF3_1	0.914	1.000
TCF3 M08710_2.00	Homo sapiens	VVCASCTGCHN	NDGCAGSTGBB	Misc Kulakovskiy et al.(2013) TFE2_HUMAN.H11MO.0.A	0.914	1.000
TCF3 M09791_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E12_Q6	0.914	1.000
TCF3 M09792_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E2A_Q6_01	0.914	1.000
TCF3 M09793_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E2A_Q6_02	0.914	1.000
TCF3 M09794_2.00	Homo sapiens	VVVVMCACCTGCNBB	VVNGCAGGTGKBBBB	Transfac Matys et al.(2006) V$E47_01	0.914	1.000
TCF3 M09795_2.00	Homo sapiens	NNKWRCACCTGYDNNN	NNNHRCAGGTGYWMNN	Transfac Matys et al.(2006) V$E47_02	0.914	1.000
Tcf3 M09465_2.00	Mus musculus	ABWTCAAAGS	SCTTTGAWVT	Misc Heinz et al.(2010) mES-Tcf3_GSE11724	0.886	0.942
Tcf3 M09466_2.00	Mus musculus	VCAGCTGBNN	NNVCAGCTGB	Misc Heinz et al.(2010) proBcell-E2A_GSE21978	0.886	0.942
Tcf3 M09886_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E47_05	0.886	0.942
Tcf12 M01740_2.00	Mus musculus	NVCAYCTGB	VCAGRTGBN	PBM Weirauch et al.(2014) pTH5071	0.886	0.923
TCF12 M04137_2.00	Homo sapiens	VCACSTGB	VCASGTGB	SELEX Yin et al.(2017) TCF12_eDBD_HT-SELEX	0.886	0.923
Tcf12 M08062_2.00	Mus musculus	RRCAGCTGNNN	NNNCAGCTGYY	ChIP-seq Mathelier et al.(2014) MA0521.1	0.886	0.923
TCF12 M07805_2.00	Homo sapiens	NVDSCAGSTGB	VCASCTGSHBN	ChIP-seq Gerstein et al.(2012) GM12878_TCF12_HudsonAlpha	0.886	0.923
TCF12 M07806_2.00	Homo sapiens	VCASCTGB	VCAGSTGB	ChIP-seq Gerstein et al.(2012) H1-hESC_TCF12_HudsonAlpha	0.886	0.923
TCF12 M08731_2.00	Homo sapiens	CMCASCTGSH	DSCAGSTGKG	Misc Kulakovskiy et al.(2013) HTF4_HUMAN.H11MO.0.A	0.886	0.923
Tcf12 M08762_2.00	Mus musculus	VMCASCTGSH	DSCAGSTGKB	Misc Kulakovskiy et al.(2013) HTF4_MOUSE.H11MO.0.A	0.886	0.923
TCF12 M09458_2.00	Homo sapiens	NNVCAGCTGB	VCAGCTGBNN	Misc Heinz et al.(2010) GM12878-Tcf12_GSE32465	0.886	0.923
TCF12 M09858_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HEB_Q6	0.886	0.923
TCF12 M09859_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HTF4_Q2	0.886	0.923
TCF12 M09860_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF12_01	0.886	0.923
TCF12 M09861_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF12_03	0.886	0.923
TCF12 M09862_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF12_05	0.886	0.923
TCF12 M04138_2.00	Homo sapiens	NCAYCTGN	NCAGRTGN	SELEX Yin et al.(2017) TCF12_eDBD_Methyl-HT-SELEX	0.886	0.923
Tcf3 M00753_2.00	Mus musculus	VCACCTGBN	NVCAGGTGB	PBM Weirauch et al.(2013) pTH3866	0.886	0.846
Tcf3 M01723_2.00	Mus musculus	NNVCACSTGB	VCASGTGBNN	PBM Weirauch et al.(2014) pTH4580	0.886	0.846
Tcf3 M00118_2.00	Mus musculus	VCAYCTGB	VCAGRTGB	PBM Badis et al.(2009) Tcfe2a_3865	0.886	0.846
Tcf4 M01750_2.00	Mus musculus	VCAGVTGBN	NVCABCTGB	PBM Weirauch et al.(2014) pTH5101	0.884	0.885
TCF4 M02807_2.00	Homo sapiens	HRCACCTGBN	NVCAGGTGYD	SELEX Jolma et al.(2013) TCF4_1	0.884	0.885
TCF4 M02808_2.00	Homo sapiens	NVCACCTBBN	NVVAGGTGBN	SELEX Jolma et al.(2013) TCF4_2	0.884	0.885
TCF4 M02728_2.00	Homo sapiens	RCACCTG	CAGGTGY	SELEX Jolma et al.(2010) TCF4_dimer	0.884	0.885
TCF4 M04214_2.00	Homo sapiens	VCACCTGB	VCAGGTGB	SELEX Yin et al.(2017) TCF4_eDBD_HT-SELEX	0.884	0.885
Tcf4 M08775_2.00	Mus musculus	HRCACCTGB	VCAGGTGYD	Misc Kulakovskiy et al.(2013) ITF2_MOUSE.H11MO.0.B	0.884	0.885
TCF4 M09461_2.00	Homo sapiens	ASWTCAAAGRVN	NBYCTTTGAWST	Misc Heinz et al.(2010) Hct116-Tcf4_SRA012054	0.884	0.885
TCF4 M04215_2.00	Homo sapiens	VCACCTGN	NCAGGTGB	SELEX Yin et al.(2017) TCF4_eDBD_Methyl-HT-SELEX	0.884	0.885
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSMLUP00000010231	bHLH	541	594	RRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQTKLLILHQAVSVILNLE

Links
Other bHLH family TFs
Other *Myotis lucifugus* TFs

208 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AGABI2DRAFT_197789	Agaricus bisporus	AGABI2DRAFT_197789	N	0.000
BN946_scf185001.g47	Trametes cinnabarina	BN946_scf185001.g47	N	0.000
BOTBODRAFT_112907	Botryobasidium botryosum	BOTBODRAFT_112907	N	0.000
BOTBODRAFT_27262	Botryobasidium botryosum	BOTBODRAFT_27262	N	0.000
CC1G_03731	Coprinopsis cinerea	CC1G_03731	N	0.000
CC1G_08665	Coprinopsis cinerea	CC1G_08665	N	0.000
CERSUDRAFT_109864	Ceriporiopsis subvermispora	CERSUDRAFT_109864	N	0.000
CERSUDRAFT_114830	Ceriporiopsis subvermispora	CERSUDRAFT_114830	N	0.000
CERSUDRAFT_115065	Ceriporiopsis subvermispora	CERSUDRAFT_115065	N	0.000
CNG02270	Cryptococcus neoformans	CNG02270	N	0.000
CY34DRAFT_31562	Suillus luteus	CY34DRAFT_31562	N	0.000
CY34DRAFT_809277	Suillus luteus	CY34DRAFT_809277	N	0.000
DICSQDRAFT_14849	Dichomitus squalens	DICSQDRAFT_14849	N	0.000
estExt_fgenesh3_kg.C_80174	Heterobasidion annosum	estExt_fgenesh3_kg.C_80174	N	0.000
estExt_fgeneshPB_pg.C_140262	Phycomyces blakesleeanus	estExt_fgeneshPB_pg.C_140262	N	0.000
e_gw1.12.266.1	Mucor circinelloides	e_gw1.12.266.1	N	0.000
e_gww2.5.562.1	Phanerochaete chrysosporium	e_gww2.5.562.1	N	0.000
e_gww2.7.722.1	Phanerochaete chrysosporium	e_gww2.7.722.1	N	0.000
fgeneshPB_pg.11__148	Phycomyces blakesleeanus	fgeneshPB_pg.11__148	N	0.000
FIBRA_07597	Fibroporia radiculosa	FIBRA_07597	N	0.000
FOMPIDRAFT_1033652	Fomitopsis pinicola	FOMPIDRAFT_1033652	N	0.000
FOMPIDRAFT_1085863	Fomitopsis pinicola	FOMPIDRAFT_1085863	N	0.000
FOMPIDRAFT_1145789	Fomitopsis pinicola	FOMPIDRAFT_1145789	N	0.000
FOMPIDRAFT_1161920	Fomitopsis pinicola	FOMPIDRAFT_1161920	N	0.000
GALMADRAFT_233958	Galerina marginata	GALMADRAFT_233958	N	0.000
GALMADRAFT_246744	Galerina marginata	GALMADRAFT_246744	N	0.000
GLOTRDRAFT_112363	Gloeophyllum trabeum	GLOTRDRAFT_112363	N	0.000
gw1.1.1202.1	Heterobasidion annosum	gw1.1.1202.1	N	0.000
HETIRDRAFT_147959	Heterobasidion irregulare	HETIRDRAFT_147959	N	0.000
HETIRDRAFT_181137	Heterobasidion irregulare	HETIRDRAFT_181137	N	0.000
HYDPIDRAFT_99864	Hydnomerulius pinastri	HYDPIDRAFT_99864	N	0.000
JAAARDRAFT_209121	Jaapia argillacea	JAAARDRAFT_209121	N	0.000
JAAARDRAFT_288915	Jaapia argillacea	JAAARDRAFT_288915	N	0.000
K443DRAFT_104168	Laccaria amethystina	K443DRAFT_104168	N	0.000
K443DRAFT_676063	Laccaria amethystina	K443DRAFT_676063	N	0.000
L804_03638	Cryptococcus gattii	L804_03638	N	0.000
LACBIDRAFT_300881	Laccaria bicolor	LACBIDRAFT_300881	N	0.000
M404DRAFT_1002106	Pisolithus tinctorius	M404DRAFT_1002106	N	0.000
M404DRAFT_998133	Pisolithus tinctorius	M404DRAFT_998133	N	0.000
M413DRAFT_216932	Hebeloma cylindrosporum	M413DRAFT_216932	N	0.000
M413DRAFT_237712	Hebeloma cylindrosporum	M413DRAFT_237712	N	0.000
Moror_1174	Moniliophthora roreri	Moror_1174	N	0.000
Moror_346	Moniliophthora roreri	Moror_346	N	0.000
Moror_572	Moniliophthora roreri	Moror_572	N	0.000
PAXRUDRAFT_33927	Paxillus rubicundulus	PAXRUDRAFT_33927	N	0.000
PHACADRAFT_254049	Phanerochaete carnosa	PHACADRAFT_254049	N	0.000
PHACADRAFT_83199	Phanerochaete carnosa	PHACADRAFT_83199	N	0.000
PHLGIDRAFT_16085	Phlebiopsis gigantea	PHLGIDRAFT_16085	N	0.000
PHLGIDRAFT_451232	Phlebiopsis gigantea	PHLGIDRAFT_451232	N	0.000
PILCRDRAFT_122351	Piloderma croceum	PILCRDRAFT_122351	N	0.000
PISMIDRAFT_283095	Pisolithus microcarpus	PISMIDRAFT_283095	N	0.000
PISMIDRAFT_650733	Pisolithus microcarpus	PISMIDRAFT_650733	N	0.000
PLEOSDRAFT_1060467	Pleurotus ostreatus	PLEOSDRAFT_1060467	N	0.000
POSPLDRAFT_135054	Postia placenta	POSPLDRAFT_135054	N	0.000
POSPLDRAFT_135057	Postia placenta	POSPLDRAFT_135057	N	0.000
POSPLDRAFT_135062	Postia placenta	POSPLDRAFT_135062	N	0.000
SCHCODRAFT_269947	Schizophyllum commune	SCHCODRAFT_269947	N	0.000
SCHCODRAFT_86194	Schizophyllum commune	SCHCODRAFT_86194	N	0.000
SCLCIDRAFT_36428	Scleroderma citrinum	SCLCIDRAFT_36428	N	0.000
SERLA73DRAFT_176212	Serpula lacrymans	SERLA73DRAFT_176212	N	0.000
SERLA73DRAFT_66208	Serpula lacrymans	SERLA73DRAFT_66208	N	0.000
V565_046740	Rhizoctonia solani	V565_046740	N	0.000

TCF3 (Myotis lucifugus) bHLH

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

208 Related TFs

TCF3 **(Myotis lucifugus)
bHLH**