Tcf12 (Mus musculus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMUSG00000032228 T035706_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf12
M01740_2.00		 Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071		 (Direct) (Direct)
Tcf12
M08062_2.00		 Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1		 (Direct) (Direct)
Tcf12
M08762_2.00		 Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.914 1.000
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.914 1.000
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.914 1.000
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.914 1.000
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.914 1.000
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.914 1.000
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.914 1.000
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.914 1.000
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.914 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.914 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.914 0.885
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.912 0.962
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.912 0.962
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.912 0.962
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.912 0.962
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.912 0.962
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.912 0.962
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.912 0.962
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.962
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.962
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.962
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01740_2.00 bHLH 20 73

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000034755 bHLH 578 631
ENSMUSP00000138832 bHLH 598 651
ENSMUSP00000138925 bHLH 578 631
ENSMUSP00000138978 bHLH 432 485
ENSMUSP00000139334 bHLH 408 461
ENSMUSP00000139364 bHLH 602 655
ENSMUSP00000139365 bHLH 602 655

Links

Other bHLH family TFs
Other Mus musculus TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001734 Aedes aegypti AAEL001734 I 0.000
AALB004290 Anopheles albimanus AALB004290 I 0.000
AARA007509 Anopheles arabiensis AARA007509 I 0.000
AATE010112 Anopheles atroparvus AATE010112 I 0.000
ACEP18226 Atta cephalotes ACEP18226 I 0.000
ACHR009808 Anopheles christyi ACHR009808 I 0.000
ACOM024837 Anopheles coluzzii ACOM024837 I 0.000
ACUA007612 Anopheles culicifacies ACUA007612 I 0.000
ACYPI56663 Acyrthosiphon pisum ACYPI56663 I 0.000
ADIR008104 Anopheles dirus ADIR008104 I 0.000
AEPI002211 Anopheles epiroticus AEPI002211 I 0.000
AFAF003449 Anopheles farauti AFAF003449 I 0.000
AFUN010689 Anopheles funestus AFUN010689 I 0.000
AGAP006018 Anopheles gambiae AGAP006018 I 0.000
AMAM005405 Anopheles maculatus AMAM005405 I 0.000
AMEC009148 Anopheles melas AMEC009148 I 0.000
AMEM002094 Anopheles merus AMEM002094 I 0.000
AMIN010926 Anopheles minimus AMIN010926 I 0.000
AQUA005657 Anopheles quadriannulatus AQUA005657 I 0.000
ASTEI06308 Anopheles stephensi ASTEI06308 I 0.000
BGIBMGA012232 Bombyx mori BGIBMGA012232 I 0.000
Cflo_05255--XP_001121063.1_APIME Camponotus floridanus Cflo_05255--XP_001121063.1_APIME I 0.000
CLEC000425 Cimex lectularius CLEC000425 I 0.000
CPIJ011217 Culex quinquefasciatus CPIJ011217 I 0.000
CpipJ_CPIJ011217 Culex pipiens CpipJ_CPIJ011217 I 0.000
DAPPUDRAFT_299763 Daphnia pulex DAPPUDRAFT_299763 I 0.000
bab1 Drosophila melanogaster FBgn0004870 D 0.000
bab2 Drosophila melanogaster FBgn0025525 I 0.000
bab Drosophila virilis FBgn0064311 I 0.000
GF10078 Drosophila ananassae FBgn0087119 I 0.000
GF10081 Drosophila ananassae FBgn0087122 I 0.000
GG14622 Drosophila erecta FBgn0106878 I 0.000
GG14628 Drosophila erecta FBgn0106884 I 0.000
GH15670 Drosophila grimshawi FBgn0123141 I 0.000
GI12710 Drosophila mojavensis FBgn0135467 I 0.000
GI12712 Drosophila mojavensis FBgn0135469 I 0.000
GL16678 Drosophila persimilis FBgn0154282 I 0.000
GL25461 Drosophila persimilis FBgn0163045 I 0.000
GM14236 Drosophila sechellia FBgn0169162 I 0.000
GM14241 Drosophila sechellia FBgn0169167 I 0.000
GD13495 Drosophila simulans FBgn0185206 I 0.000
GD13499 Drosophila simulans FBgn0185210 I 0.000
GJ12696 Drosophila virilis FBgn0199933 I 0.000
GK16858 Drosophila willistoni FBgn0218858 I 0.000
GK16863 Drosophila willistoni FBgn0218863 I 0.000
GE20986 Drosophila yakuba FBgn0238269 I 0.000
GA23169 Drosophila pseudoobscura FBgn0244571 I 0.000
GA28271 Drosophila pseudoobscura FBgn0249634 I 0.000
GB40871 Apis mellifera GB40871 I 0.000
HHAL003166-PA Halyomorpha halys HHAL003166-PA I 0.000
HMEL008789 Heliconius melpomene HMEL008789 I 0.000
Hsal_00151--XP_001121063.1_APIME Harpegnathos saltator Hsal_00151--XP_001121063.1_APIME I 0.000
KGM_03925 Danaus plexippus KGM_03925 I 0.000
L798_02764 Zootermopsis nevadensis L798_02764 I 0.000
LCUP006237 Lucilia cuprina LCUP006237 I 0.000
LCUP015100 Lucilia cuprina LCUP015100 I 0.000
LDEC013196 Leptinotarsa decemlineata LDEC013196 I 0.000
MCINX015686 Melitaea cinxia MCINX015686 I 0.000
MDOA008247 Musca domestica MDOA008247 I 0.000
MDOA013491 Musca domestica MDOA013491 I 0.000
MESCA009218 Megaselia scalaris MESCA009218 I 0.000
NV19234 Nasonia vitripennis NV19234 I 0.000
PHUM501420 Pediculus humanus PHUM501420 I 0.000
PPAI009278 Phlebotomus papatasi PPAI009278 I 0.000
RPRC003948 Rhodnius prolixus RPRC003948 I 0.000
SINV15831 Solenopsis invicta SINV15831 I 0.000
TC003627 Tribolium castaneum TC003627 I 0.000
YQE_07459 Dendroctonus ponderosae YQE_07459 I 0.000