CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HES1
(
Oryctolagus cuniculus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSOCUG00000009363
T036028_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hes1
M01726_2.00
Mus musculus
NVCACGYKNN
NNMRCGTGBN
PBM
Weirauch et al.(2014)
pTH5059
0.914
1.000
HES1
M04090_2.00
Homo sapiens
VVCACGYGHM
KDCRCGTGBB
SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX
0.914
1.000
HES1
M09822_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q2
0.914
1.000
HES1
M09823_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q3
0.914
1.000
HES1
M09824_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q4
0.914
1.000
HES1
M09825_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q6
0.914
1.000
HES1
M04091_2.00
Homo sapiens
VNYACNYNHN
NDNRNGTRNB
SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000022035
bHLH
35
92
RKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ
Links
Other
bHLH
family TFs
Other
Oryctolagus cuniculus
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CERSUDRAFT_114695
Ceriporiopsis subvermispora
CERSUDRAFT_114695
I
DACRYDRAFT_22521
Dacryopinax sp
DACRYDRAFT_22521
I
DICSQDRAFT_88737
Dichomitus squalens
DICSQDRAFT_88737
I
EDP45487.1
Malassezia globosa
EDP45487.1
N
M408DRAFT_332528
Serendipita vermifera
M408DRAFT_332528
I
MSY001_1466
Malassezia sympodialis
MSY001_1466
N
PAN0_103d6719
Pseudozyma antarctica
PAN0_103d6719
N
PHSY_000426
Pseudozyma hubeiensis
PHSY_000426
N
RO3G_02623
Rhizopus oryzae
RO3G_02623
N
sr14830
Sporisorium reilianum
sr14830
N
UHOR_05949
Ustilago hordei
UHOR_05949
N
UM03925
Ustilago maydis
UM03925
N
V565_176590
Rhizoctonia solani
V565_176590
I