CLOCK (Ochotona princeps)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSOPRG00000005292 T036326_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Clock
M01735_2.00 		Mus musculus
NNCAYRTGNN
NNCAYRTGNN		 PBM
Weirauch et al.(2014)
pTH5056 		0.914 1.000
CLOCK
M02789_2.00 		Homo sapiens
DACACGTGYH
DRCACGTGTH		 SELEX
Jolma et al.(2013)
CLOCK_1 		0.914 1.000
CLOCK
M04129_2.00 		Homo sapiens
NMCACGTGYN
NRCACGTGKN		 SELEX
Yin et al.(2017)
CLOCK_eDBD_HT-SELEX 		0.914 1.000
CLOCK
M08728_2.00 		Homo sapiens
DBBBCAYKTGNNHB
VDNNCAMRTGVVVH		 Misc
Kulakovskiy et al.(2013)
CLOCK_HUMAN.H11MO.0.C 		0.914 1.000
Clock
M08760_2.00 		Mus musculus
DBBBCAYKTGNNHB
VDNNCAMRTGVVVH		 Misc
Kulakovskiy et al.(2013)
CLOCK_MOUSE.H11MO.0.C 		0.914 1.000
Clock
M09473_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Clock_GSE39860 		0.914 1.000
CLOCK
M09849_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CLOCK_Q6 		0.914 1.000
CLOCK
M04130_2.00 		Homo sapiens
NRCRCRTGBH
DVCAYGYGYN		 SELEX
Yin et al.(2017)
CLOCK_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000004875 bHLH 35 85

Links

Other bHLH family TFs
Other Ochotona princeps TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_041030 Acremonium chrysogenum ACRE_041030 N
BBA_03180 Beauveria bassiana BBA_03180 N
CCM_00038 Cordyceps militaris CCM_00038 N
CFIO01_06836 Colletotrichum fioriniae CFIO01_06836 N
Cob_11092 Colletotrichum orbiculare Cob_11092 N
CPUR_00509 Claviceps purpurea CPUR_00509 N
CSUB01_09286 Colletotrichum sublineola CSUB01_09286 N
estExt_fgenesh1_pm.C_sca_2_chr3_3_00071 Nectria haematococca estExt_fgenesh1_pm.C_sca_2_chr3_3_00071 N
estExt_Genewise1Plus.C_sca_18_chr2_1_00709 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00709 N
FFUJ_04865 Fusarium fujikuroi FFUJ_04865 N
FFUJ_05806 Fusarium fujikuroi FFUJ_05806 N
FGRRES_05279 Fusarium graminearum FGRRES_05279 N
FGRRES_08321 Fusarium graminearum FGRRES_08321 N
FOXG_03505 Fusarium oxysporum FOXG_03505 N
FOXG_08428 Fusarium oxysporum FOXG_08428 N
FOXG_17233 Fusarium oxysporum FOXG_17233 N
FPSE_07213 Fusarium pseudograminearum FPSE_07213 N
FPSE_09485 Fusarium pseudograminearum FPSE_09485 N
FVEG_02371 Fusarium verticillioides FVEG_02371 N
GLRG_06557 Colletotrichum graminicola GLRG_06557 N
MAC_06654 Metarhizium acridum MAC_06654 N
MAJ_03430 Metarhizium majus MAJ_03430 N
MAJ_06206 Metarhizium majus MAJ_06206 N
MAM_00381 Metarhizium album MAM_00381 N
MANI_019393 Metarhizium anisopliae MANI_019393 N
MANI_025227 Metarhizium anisopliae MANI_025227 N
MBR_00832 Metarhizium brunneum MBR_00832 N
MBR_06926 Metarhizium brunneum MBR_06926 N
MGU_05340 Metarhizium guizhouense MGU_05340 N
MGU_06337 Metarhizium guizhouense MGU_06337 N
NechaG103657 Fusarium solani NechaG103657 N
NechaG66207 Fusarium solani NechaG66207 N
OCS_05613 Ophiocordyceps sinensis OCS_05613 N
PV06_09882 Exophiala oligosperma PV06_09882 N
S40285_01446 Stachybotrys chlorohalonata S40285_01446 N
S40288_00390 Stachybotrys chartarum S40288_00390 N
TRIATDRAFT_141876 Trichoderma atroviride TRIATDRAFT_141876 N
TRIREDRAFT_111013 Trichoderma reesei TRIREDRAFT_111013 N
TRIREDRAFT_56214 Trichoderma reesei TRIREDRAFT_56214 N
TRIVIDRAFT_115781 Trichoderma virens TRIVIDRAFT_115781 N
TRIVIDRAFT_76453 Trichoderma virens TRIVIDRAFT_76453 N
UV8b_336 Ustilaginoidea virens UV8b_336 N
VHEMI06572 Torrubiella hemipterigena VHEMI06572 N
X797_007257 Metarhizium robertsii X797_007257 N
X797_008514 Metarhizium robertsii X797_008514 N