CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPANG00000016141
(
Papio anubis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSPANG00000016141
T036540_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Usf1
M01732_2.00
Mus musculus
NRYCACGTGNN
NNCACGTGRYN
PBM
Weirauch et al.(2014)
pTH4376
0.914
1.000
USF1
M02792_2.00
Homo sapiens
RNCACGTGRY
RYCACGTGNY
SELEX
Jolma et al.(2013)
USF1_1
0.914
1.000
USF1
M04146_2.00
Homo sapiens
NVCACGTGVCN
NGBCACGTGBN
SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX
0.914
1.000
USF1
M08056_2.00
Homo sapiens
RGTCACRTGVB
VBCAYGTGACY
ChIP-seq
Mathelier et al.(2014)
MA0093.2
0.914
1.000
USF1
M07807_2.00
Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha
0.914
1.000
USF1
M07808_2.00
Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB
ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha
0.914
1.000
USF1
M07809_2.00
Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY
ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha
0.914
1.000
USF1
M07810_2.00
Homo sapiens
VGTCACGTGRB
VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha
0.914
1.000
USF1
M07811_2.00
Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN
ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha
0.914
1.000
USF1
M08733_2.00
Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB
Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A
0.914
1.000
Usf1
M08756_2.00
Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN
Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A
0.914
1.000
USF1
M09460_2.00
Homo sapiens
YCACGTGRBN
NVYCACGTGR
Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465
0.914
1.000
USF1
M09867_2.00
Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN
Transfac
Matys et al.(2006)
V$USF_01
0.914
1.000
USF1
M09868_2.00
Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN
Transfac
Matys et al.(2006)
V$USF_02
0.914
1.000
USF1
M09869_2.00
Homo sapiens
HCACGTGH
DCACGTGD
Transfac
Matys et al.(2006)
V$USF_C
0.914
1.000
USF1
M04147_2.00
Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB
SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPANP00000009351
bHLH
228
283
RRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR
Links
Other
bHLH
family TFs
Other
Papio anubis
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R005482
Aptenodytes forsteri
Afo_R005482
N
Alligator_sinensis_CCG000203.1
Alligator sinensis
Alligator_sinensis_CCG000203.1
N
Brh_R007650
Buceros rhinoceros
Brh_R007650
N
USF3
Anolis carolinensis
ENSACAG00000006745
N
ENSAMEG00000005235
Ailuropoda melanoleuca
ENSAMEG00000005235
N
USF3
Canis familiaris
ENSCAFG00000010692
N
USF3
Callithrix jacchus
ENSCJAG00000020264
N
ENSCPOG00000006428
Cavia porcellus
ENSCPOG00000006428
N
ENSCSAG00000006785
Chlorocebus sabaeus
ENSCSAG00000006785
N
usf3
Danio rerio
ENSDARG00000077431
N
USF3
Dasypus novemcinctus
ENSDNOG00000040900
N
USF3
Equus caballus
ENSECAG00000024549
N
ENSFALG00000005129
Ficedula albicollis
ENSFALG00000005129
N
USF3
Felis catus
ENSFCAG00000004876
N
USF3
Homo sapiens
ENSG00000176542
N
usf3
Gasterosteus aculeatus
ENSGACG00000003204
N
ENSGALG00000014808
Gallus gallus
ENSGALG00000014808
N
USF3
Gorilla gorilla
ENSGGOG00000001005
N
ENSGMOG00000015548
Gadus morhua
ENSGMOG00000015548
N
ENSLACG00000009844
Latimeria chalumnae
ENSLACG00000009844
N
USF3
Loxodonta africana
ENSLAFG00000009455
N
ENSLOCG00000003056
Lepisosteus oculatus
ENSLOCG00000003056
N
ENSMEUG00000005560
Macropus eugenii
ENSMEUG00000005560
N
USF3
Meleagris gallopavo
ENSMGAG00000014246
N
USF3
Myotis lucifugus
ENSMLUG00000004274
N
USF3
Monodelphis domestica
ENSMODG00000018158
N
Usf3
Mus musculus
ENSMUSG00000068284
N
ENSNLEG00000004615
Nomascus leucogenys
ENSNLEG00000004615
N
ENSOARG00000019468
Ovis aries
ENSOARG00000019468
N
USF3
Oryctolagus cuniculus
ENSOCUG00000013550
N
USF3
Otolemur garnettii
ENSOGAG00000032665
N
ENSONIG00000014090
Oreochromis niloticus
ENSONIG00000014090
N
USF3
Ochotona princeps
ENSOPRG00000014253
N
usf3
Oryzias latipes
ENSORLG00000009097
N
ENSP00000420721
Macaca fascicularis
ENSP00000420721
N
ENSP00000420721-D1
Bos grunniens
ENSP00000420721-D1
N
ENSPANG00000019193
Papio anubis
ENSPANG00000019193
N
ENSPFOG00000009350
Poecilia formosa
ENSPFOG00000009350
N
ENSPPYG00000013537
Pongo abelii
ENSPPYG00000013537
N
USF3
Pan troglodytes
ENSPTRG00000030159
N
USF3
Pteropus vampyrus
ENSPVAG00000006151
N
Usf3
Rattus norvegicus
ENSRNOG00000027756
N
ENSSHAG00000006667
Sarcophilus harrisii
ENSSHAG00000006667
N
USF3
Sus scrofa
ENSSSCG00000011918
N
ENSSTOG00000029223
Ictidomys tridecemlineatus
ENSSTOG00000029223
N
ENSTGUG00000013363
Taeniopygia guttata
ENSTGUG00000013363
N
ENSTGUG00000013682
Taeniopygia guttata
ENSTGUG00000013682
N
USF3
Tursiops truncatus
ENSTTRG00000000281
N
USF3
Vicugna pacos
ENSVPAG00000011950
N
ENSXMAG00000010050
Xiphophorus maculatus
ENSXMAG00000010050
N
Gfo_R000246
Geospiza fortis
Gfo_R000246
N
Myotis_brandtii_KIAA2018_10016078
Myotis brandtii
Myotis_brandtii_KIAA2018_10016078
N
Pvit_04479
Pogona vitticeps
Pvit_04479
N
Tal_R000800
Tyto alba
Tal_R000800
N
usf3
Xenopus tropicalis
XB-GENE-6459248
N