CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000003604
(
Pelodiscus sinensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSPSIG00000003604
T036930_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcf21
M01746_2.00
Mus musculus
RMCAKMTGK
MCAKMTGKY
PBM
Weirauch et al.(2014)
pTH5087
0.914
1.000
Tcf21
M02819_2.00
Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB
SELEX
Jolma et al.(2013)
Tcf21_1
0.914
1.000
TCF21
M04092_2.00
Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1
0.914
1.000
TCF21
M04093_2.00
Homo sapiens
NRCCATATGKYV
BRMCATATGGYN
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2
0.914
1.000
TCF21
M04094_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1
0.914
1.000
TCF21
M04095_2.00
Homo sapiens
BACCATATGKYV
BRMCATATGGTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2
0.914
1.000
Msc
M01730_2.00
Mus musculus
NVCRKMYGBN
NVCRKMYGBN
PBM
Weirauch et al.(2014)
pTH5112
0.914
0.981
MSC
M02801_2.00
Homo sapiens
AACAGCTGTT
AACAGCTGTT
SELEX
Jolma et al.(2013)
MSC_1
0.914
0.981
MSC
M04183_2.00
Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1
0.914
0.981
MSC
M04184_2.00
Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2
0.914
0.981
MSC
M04187_2.00
Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1
0.914
0.981
MSC
M04188_2.00
Homo sapiens
BRMCATATGKYN
NRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2
0.914
0.981
MSC
M04185_2.00
Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1
0.914
0.981
MSC
M04186_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2
0.914
0.981
MSC
M04189_2.00
Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1
0.914
0.981
MSC
M04190_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000003801
bHLH
80
132
QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLR
Links
Other
bHLH
family TFs
Other
Pelodiscus sinensis
TFs
184 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_09159
Capronia coronata
A1O1_09159
I
A1O3_04845
Capronia epimyces
A1O3_04845
I
A1O5_10900
Cladophialophora psammophila
A1O5_10900
I
A1O7_09067
Cladophialophora yegresii
A1O7_09067
I
ACRE_046280
Acremonium chrysogenum
ACRE_046280
I
BAUCODRAFT_39053
Baudoinia compniacensis
BAUCODRAFT_39053
I
BBA_06883
Beauveria bassiana
BBA_06883
I
Bcin12g04500
Botrytis cinerea
Bcin12g04500
I
BDDG_06646
Blastomyces dermatitidis
BDDG_06646
I
CADAFLAG00008989
Aspergillus flavus
CADAFLAG00008989
I
CADANGAG00013867
Aspergillus niger
CADANGAG00013867
I
nirA
Aspergillus nidulans
CADANIAG00002651
D
CCM_02994
Cordyceps militaris
CCM_02994
I
CFIO01_00183
Colletotrichum fioriniae
CFIO01_00183
I
CGGC5_14397
Colletotrichum gloeosporioides
CGGC5_14397
I
CH063_11489
Colletotrichum higginsianum
CH063_11489
I
CHGG_04711
Chaetomium globosum
CHGG_04711
I
CIMG_09213
Coccidioides immitis
CIMG_09213
I
CMQ_2922
Grosmannia clavigera
CMQ_2922
I
Cob_02846
Colletotrichum orbiculare
Cob_02846
I
CPC735_016280
Coccidioides posadasii
CPC735_016280
I
CPUR_05329
Claviceps purpurea
CPUR_05329
I
CSUB01_05654
Colletotrichum sublineola
CSUB01_05654
I
CTHT_0032940
Chaetomium thermophilum
CTHT_0032940
I
DOTSEDRAFT_74135
Dothistroma septosporum
DOTSEDRAFT_74135
I
EPUS_07480
Endocarpon pusillum
EPUS_07480
I
estExt_Genewise1.C_31155
Mycosphaerella fijiensis
estExt_Genewise1.C_31155
I
estExt_Genewise1.C_31209
Neurospora discreta
estExt_Genewise1.C_31209
I
estExt_Genewise1Plus.C_chr_90305
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_90305
I
EURHEDRAFT_481352
Aspergillus ruber
EURHEDRAFT_481352
I
F503_02919
Ophiostoma piceae uamh
F503_02919
I
FFUJ_04567
Fusarium fujikuroi
FFUJ_04567
I
fgenesh1_pg.sca_82_chr10_2_0000336
Nectria haematococca
fgenesh1_pg.sca_82_chr10_2_0000336
I
FGRRES_16471_M
Fusarium graminearum
FGRRES_16471_M
I
FOXG_06396
Fusarium oxysporum
FOXG_06396
I
FPSE_07163
Fusarium pseudograminearum
FPSE_07163
I
FVEG_04246
Fusarium verticillioides
FVEG_04246
I
G647_08026
Cladophialophora carrionii
G647_08026
I
GGTG_08450
Gaeumannomyces graminis
GGTG_08450
I
GLRG_07227
Colletotrichum graminicola
GLRG_07227
I
GMDG_07670
Pseudogymnoascus destructans
GMDG_07670
I
GSTUM_00002283001
Tuber melanosporum
GSTUM_00002283001
I
H101_04520
Trichophyton interdigitale
H101_04520
I
HMPREF1120_01049
Exophiala dermatitidis
HMPREF1120_01049
I
HMPREF1541_10049
Cyphellophora europaea
HMPREF1541_10049
I
HMPREF1624_06090
Sporothrix schenckii
HMPREF1624_06090
I
MAC_06769
Metarhizium acridum
MAC_06769
I
MAJ_02884
Metarhizium majus
MAJ_02884
I
MAM_04298
Metarhizium album
MAM_04298
I
MANI_017308
Metarhizium anisopliae
MANI_017308
I
MAPG_05250
Magnaporthe poae
MAPG_05250
I
MBM_00857
Marssonina brunnea
MBM_00857
I
MBR_01966
Metarhizium brunneum
MBR_01966
I
MCYG_05152
Microsporum canis
MCYG_05152
I
MGG_01518
Magnaporthe oryzae
MGG_01518
I
MGU_02647
Metarhizium guizhouense
MGU_02647
I
MGYG_06191
Microsporum gypseum
MGYG_06191
I
MYCFIDRAFT_95405
Pseudocercospora fijiensis
MYCFIDRAFT_95405
I
Mycgr3G75413
Zymoseptoria tritici
Mycgr3G75413
I
MYCTH_2298994
Myceliophthora thermophila
MYCTH_2298994
I
nit-4
Neurospora crassa
NCU08294
D
NechaG85733
Fusarium solani
NechaG85733
I
NEUTE1DRAFT_78894
Neurospora tetrasperma
NEUTE1DRAFT_78894
I
OCS_03410
Ophiocordyceps sinensis
OCS_03410
I
OIDMADRAFT_145878
Oidiodendron maius
OIDMADRAFT_145878
I
PAAG_02447
Paracoccidioides sp lutzii
PAAG_02447
I
PABG_04941
Paracoccidioides brasiliensis
PABG_04941
I
PDE_07492
Penicillium oxalicum
PDE_07492
I
PFICI_05113
Pestalotiopsis fici
PFICI_05113
I
PMAA_031240
Talaromyces marneffei
PMAA_031240
I
PMAA_031240
Penicillium marneffei
PMAA_031240
I
PODANS_6_3660
Podospora anserina
PODANS_6_3660
I
PV04_09653
Capronia semiimmersa
PV04_09653
I
PV05_00256
Exophiala xenobiotica
PV05_00256
I
PV06_07400
Exophiala oligosperma
PV06_07400
I
PV07_00058
Cladophialophora immunda
PV07_00058
I
PV08_01595
Exophiala spinifera
PV08_01595
I
PV09_06735
Verruconis gallopava
PV09_06735
I
PV10_04668
Exophiala mesophila
PV10_04668
I
PV11_03250
Exophiala sideris
PV11_03250
I
S40285_05835
Stachybotrys chlorohalonata
S40285_05835
I
S40288_02558
Stachybotrys chartarum
S40288_02558
I
SAPIO_CDS7494
Scedosporium apiospermum
SAPIO_CDS7494
I
SBOR_1902
Sclerotinia borealis
SBOR_1902
I
SEPMUDRAFT_151303
Sphaerulina musiva
SEPMUDRAFT_151303
I
SMAC_00922
Sordaria macrospora
SMAC_00922
I
SPBR_00474
Sporothrix brasiliensis
SPBR_00474
I
SS1G_08630
Sclerotinia sclerotiorum
SS1G_08630
I
TEQG_04623
Trichophyton equinum
TEQG_04623
I
TESG_03837
Trichophyton tonsurans
TESG_03837
I
THITE_2115412
Thielavia terrestris
THITE_2115412
I
TRIREDRAFT_62787
Trichoderma reesei
TRIREDRAFT_62787
I
TSTA_066900
Talaromyces stipitatus
TSTA_066900
I
UCRPA7_467
Togninia minima
UCRPA7_467
I
V499_08062
Pseudogymnoascus pannorum
V499_08062
I
VDAG_08005
Verticillium dahliae
VDAG_08005
I
VDBG_01257
Verticillium albo atrum
VDBG_01257
I
VDBG_01257
Verticillium alfalfae
VDBG_01257
I
VHEMI00532
Torrubiella hemipterigena
VHEMI00532
I
X797_005996
Metarhizium robertsii
X797_005996
I
Z517_01923
Fonsecaea pedrosoi
Z517_01923
I
Z518_03222
Rhinocladiella mackenziei
Z518_03222
I
Z519_11440
Cladophialophora bantiana
Z519_11440
I