FERD3L (Pteropus vampyrus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPVAG00000001711 T037093_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FERD3L
M04140_2.00 		Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1 		0.914 1.000
FERD3L
M04141_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2 		0.914 1.000
FERD3L
M04142_2.00 		Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1 		0.914 1.000
FERD3L
M04143_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2 		0.914 1.000
Fer3
M05993_2.00 		Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC		 B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937 		0.890 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000001616 bHLH 101 153

Links

Other bHLH family TFs
Other Pteropus vampyrus TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCL14 Arabidopsis thaliana AT1G07530 N 0.000
SCL33 Arabidopsis thaliana AT2G29060 N 0.000
Bo01118s010 Brassica oleracea Bo01118s010 N 0.000
Bo4g065860 Brassica oleracea Bo4g065860 N 0.000
Bo4g168030 Brassica oleracea Bo4g168030 N 0.000
Bostr.25219s0207 Boechera stricta Bostr.25219s0207 N 0.000
Bostr.27991s0167 Boechera stricta Bostr.27991s0167 N 0.000
Bra028390 Brassica rapa Bra028390 N 0.000
Bra030688 Brassica rapa Bra030688 N 0.000
Bra035653 Brassica rapa Bra035653 N 0.000
Cagra.1671s0373 Capsella grandiflora Cagra.1671s0373 N 0.000
Cagra.3264s0006 Capsella grandiflora Cagra.3264s0006 N 0.000
Carubv10008391m.g Capsella rubella Carubv10008391m.g N 0.000
Carubv10024938m.g Capsella rubella Carubv10024938m.g N 0.000
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.000
evm.TU.supercontig_81.124 Carica papaya evm.TU.supercontig_81.124 N 0.000
evm.TU.supercontig_81.126 Carica papaya evm.TU.supercontig_81.126 N 0.000
Thhalv10006868m.g Eutrema salsugineum Thhalv10006868m.g N 0.000
Thhalv10016312m.g Eutrema salsugineum Thhalv10016312m.g N 0.000