CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TCF12 *(Pteropus vampyrus)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSPVAG00000006184	T037118_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Tcf12 M01740_2.00	Mus musculus	NVCAYCTGB	VCAGRTGBN	PBM Weirauch et al.(2014) pTH5071	0.914	1.000
TCF12 M04137_2.00	Homo sapiens	VCACSTGB	VCASGTGB	SELEX Yin et al.(2017) TCF12_eDBD_HT-SELEX	0.914	1.000
Tcf12 M08062_2.00	Mus musculus	RRCAGCTGNNN	NNNCAGCTGYY	ChIP-seq Mathelier et al.(2014) MA0521.1	0.914	1.000
TCF12 M07805_2.00	Homo sapiens	NVDSCAGSTGB	VCASCTGSHBN	ChIP-seq Gerstein et al.(2012) GM12878_TCF12_HudsonAlpha	0.914	1.000
TCF12 M07806_2.00	Homo sapiens	VCASCTGB	VCAGSTGB	ChIP-seq Gerstein et al.(2012) H1-hESC_TCF12_HudsonAlpha	0.914	1.000
TCF12 M08731_2.00	Homo sapiens	CMCASCTGSH	DSCAGSTGKG	Misc Kulakovskiy et al.(2013) HTF4_HUMAN.H11MO.0.A	0.914	1.000
Tcf12 M08762_2.00	Mus musculus	VMCASCTGSH	DSCAGSTGKB	Misc Kulakovskiy et al.(2013) HTF4_MOUSE.H11MO.0.A	0.914	1.000
TCF12 M09458_2.00	Homo sapiens	NNVCAGCTGB	VCAGCTGBNN	Misc Heinz et al.(2010) GM12878-Tcf12_GSE32465	0.914	1.000
TCF12 M09858_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HEB_Q6	0.914	1.000
TCF12 M09859_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HTF4_Q2	0.914	1.000
TCF12 M09860_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF12_01	0.914	1.000
TCF12 M09861_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF12_03	0.914	1.000
TCF12 M09862_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF12_05	0.914	1.000
TCF12 M04138_2.00	Homo sapiens	NCAYCTGN	NCAGRTGN	SELEX Yin et al.(2017) TCF12_eDBD_Methyl-HT-SELEX	0.914	1.000
Tcf3 M00753_2.00	Mus musculus	VCACCTGBN	NVCAGGTGB	PBM Weirauch et al.(2013) pTH3866	0.914	0.885
Tcf3 M01723_2.00	Mus musculus	NNVCACSTGB	VCASGTGBNN	PBM Weirauch et al.(2014) pTH4580	0.914	0.885
Tcf3 M00118_2.00	Mus musculus	VCAYCTGB	VCAGRTGB	PBM Badis et al.(2009) Tcfe2a_3865	0.914	0.885
Tcf4 M01750_2.00	Mus musculus	VCAGVTGBN	NVCABCTGB	PBM Weirauch et al.(2014) pTH5101	0.912	0.962
TCF4 M02807_2.00	Homo sapiens	HRCACCTGBN	NVCAGGTGYD	SELEX Jolma et al.(2013) TCF4_1	0.912	0.962
TCF4 M02808_2.00	Homo sapiens	NVCACCTBBN	NVVAGGTGBN	SELEX Jolma et al.(2013) TCF4_2	0.912	0.962
TCF4 M02728_2.00	Homo sapiens	RCACCTG	CAGGTGY	SELEX Jolma et al.(2010) TCF4_dimer	0.912	0.962
TCF4 M04214_2.00	Homo sapiens	VCACCTGB	VCAGGTGB	SELEX Yin et al.(2017) TCF4_eDBD_HT-SELEX	0.912	0.962
Tcf4 M08775_2.00	Mus musculus	HRCACCTGB	VCAGGTGYD	Misc Kulakovskiy et al.(2013) ITF2_MOUSE.H11MO.0.B	0.912	0.962
TCF4 M09461_2.00	Homo sapiens	ASWTCAAAGRVN	NBYCTTTGAWST	Misc Heinz et al.(2010) Hct116-Tcf4_SRA012054	0.912	0.962
TCF4 M04215_2.00	Homo sapiens	VCACCTGN	NCAGGTGB	SELEX Yin et al.(2017) TCF4_eDBD_Methyl-HT-SELEX	0.912	0.962
Tcf3 M09465_2.00	Mus musculus	ABWTCAAAGS	SCTTTGAWVT	Misc Heinz et al.(2010) mES-Tcf3_GSE11724	0.886	0.962
Tcf3 M09466_2.00	Mus musculus	VCAGCTGBNN	NNVCAGCTGB	Misc Heinz et al.(2010) proBcell-E2A_GSE21978	0.886	0.962
Tcf3 M09886_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E47_05	0.886	0.962
TCF3 M02775_2.00	Homo sapiens	NVCACCTGBN	NVCAGGTGBN	SELEX Jolma et al.(2013) TCF3_1	0.886	0.923
TCF3 M08710_2.00	Homo sapiens	VVCASCTGCHN	NDGCAGSTGBB	Misc Kulakovskiy et al.(2013) TFE2_HUMAN.H11MO.0.A	0.886	0.923
TCF3 M09791_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E12_Q6	0.886	0.923
TCF3 M09792_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E2A_Q6_01	0.886	0.923
TCF3 M09793_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$E2A_Q6_02	0.886	0.923
TCF3 M09794_2.00	Homo sapiens	VVVVMCACCTGCNBB	VVNGCAGGTGKBBBB	Transfac Matys et al.(2006) V$E47_01	0.886	0.923
TCF3 M09795_2.00	Homo sapiens	NNKWRCACCTGYDNNN	NNNHRCAGGTGYWMNN	Transfac Matys et al.(2006) V$E47_02	0.886	0.923
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSPVAP00000005847	bHLH	602	655	RRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLE

Links
Other bHLH family TFs
Other *Pteropus vampyrus* TFs

212 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AAEL001925	Aedes aegypti	AAEL001925	N	0.000
AALB005658	Anopheles albimanus	AALB005658	N	0.000
AARA007828	Anopheles arabiensis	AARA007828	N	0.000
AATE002182	Anopheles atroparvus	AATE002182	N	0.000
ACEP16593	Atta cephalotes	ACEP16593	N	0.000
ACHR006701	Anopheles christyi	ACHR006701	N	0.000
ACOM025371	Anopheles coluzzii	ACOM025371	N	0.000
ACYPI001044	Acyrthosiphon pisum	ACYPI001044	N	0.000
ADIR007954	Anopheles dirus	ADIR007954	N	0.000
AEPI005047	Anopheles epiroticus	AEPI005047	N	0.000
AFAF017055	Anopheles farauti	AFAF017055	N	0.000
AFUN003930	Anopheles funestus	AFUN003930	N	0.000
AGAP007178	Anopheles gambiae	AGAP007178	N	0.000
AMEC019779	Anopheles melas	AMEC019779	N	0.000
AMEM017655	Anopheles merus	AMEM017655	N	0.000
AMIN010644	Anopheles minimus	AMIN010644	N	0.000
AQUA002099	Anopheles quadriannulatus	AQUA002099	N	0.000
ASIS021701	Anopheles sinensis	ASIS021701	N	0.000
ASTEI02720	Anopheles stephensi	ASTEI02720	N	0.000
BGIBMGA012698	Bombyx mori	BGIBMGA012698	N	0.000
CLEC006839	Cimex lectularius	CLEC006839	N	0.000
CPIJ009909	Culex quinquefasciatus	CPIJ009909	N	0.000
CpipJ_CPIJ009909	Culex pipiens	CpipJ_CPIJ009909	N	0.000
DAPPUDRAFT_109629	Daphnia pulex	DAPPUDRAFT_109629	N	0.000
GF10235	Drosophila ananassae	FBgn0087276	N	0.000
GG14496	Drosophila erecta	FBgn0106755	N	0.000
GH14579	Drosophila grimshawi	FBgn0122055	N	0.000
GH22490	Drosophila grimshawi	FBgn0129948	N	0.000
GI13904	Drosophila mojavensis	FBgn0136658	N	0.000
GL22430	Drosophila persimilis	FBgn0160022	N	0.000
GM14099	Drosophila sechellia	FBgn0169028	N	0.000
GD13370	Drosophila simulans	FBgn0185084	N	0.000
GJ11760	Drosophila virilis	FBgn0199014	N	0.000
GK17628	Drosophila willistoni	FBgn0219627	N	0.000
GE21684	Drosophila yakuba	FBgn0238932	N	0.000
GA28320	Drosophila pseudoobscura	FBgn0249682	N	0.000
Tet	Drosophila melanogaster	FBgn0263392	N	0.000
GB52555	Apis mellifera	GB52555	N	0.000
HHAL006470-PA	Halyomorpha halys	HHAL006470-PA	N	0.000
HMEL013359	Heliconius melpomene	HMEL013359	N	0.000
Hsal_06375--XP_396330.3_APIME	Harpegnathos saltator	Hsal_06375--XP_396330.3_APIME	N	0.000
ISCW023645	Ixodes scapularis	ISCW023645	N	0.000
KGM_05165	Danaus plexippus	KGM_05165	N	0.000
L798_15814	Zootermopsis nevadensis	L798_15814	N	0.000
LCUP015162	Lucilia cuprina	LCUP015162	N	0.000
LDEC020316	Leptinotarsa decemlineata	LDEC020316	N	0.000
MDOA007787	Musca domestica	MDOA007787	N	0.000
MESCA007735	Megaselia scalaris	MESCA007735	N	0.000
NV14212	Nasonia vitripennis	NV14212	N	0.000
PHUM058930	Pediculus humanus	PHUM058930	N	0.000
RPRC001841	Rhodnius prolixus	RPRC001841	N	0.000
SINV21580	Solenopsis invicta	SINV21580	N	0.000
TC013796	Tribolium castaneum	TC013796	N	0.000
tetur24g01230	Tetranychus urticae	tetur24g01230	N	0.000
YQE_04891	Dendroctonus ponderosae	YQE_04891	N	0.000

TCF12 (Pteropus vampyrus) bHLH

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

212 Related TFs

TCF12 **(Pteropus vampyrus)
bHLH**