CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000010526
(
Sarcophilus harrisii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSSHAG00000010526
T037332_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Npas2
M01731_2.00
Mus musculus
NVCACGTGBN
NVCACGTGBN
PBM
Weirauch et al.(2014)
pTH5457
0.901
0.980
NPAS2
M04158_2.00
Homo sapiens
NRCACGTGKH
DMCACGTGYN
SELEX
Yin et al.(2017)
NPAS2_eDBD_HT-SELEX
0.901
0.980
Npas2
M09468_2.00
Mus musculus
VKCACRTGKM
KMCAYGTGMB
Misc
Heinz et al.(2010)
Liver-NPAS2_GSE39860
0.901
0.980
NPAS2
M04159_2.00
Homo sapiens
DVCRCRTGKH
DMCAYGYGBH
SELEX
Yin et al.(2017)
NPAS2_eDBD_Methyl-HT-SELEX
0.901
0.980
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000012285
bHLH
10
59
KRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKLDKTTVLEKVIGFLQKH
ENSSHAP00000012286
bHLH
10
59
KRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKLDKTTVLEKVIGFLQKH
Links
Other
bHLH
family TFs
Other
Sarcophilus harrisii
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_05843
Cladophialophora psammophila
A1O5_05843
I
COCC4DRAFT_201708
Bipolaris maydis
COCC4DRAFT_201708
N
COCCADRAFT_83899
Bipolaris zeicola
COCCADRAFT_83899
N
COCMIDRAFT_24823
Bipolaris oryzae
COCMIDRAFT_24823
N
COCSADRAFT_291837
Bipolaris sorokiniana
COCSADRAFT_291837
N
COCVIDRAFT_13259
Bipolaris victoriae
COCVIDRAFT_13259
N
estExt_fgenesh1_kg.C_190034
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_190034
N
PTT_10651
Pyrenophora teres
PTT_10651
N
SETTUDRAFT_167843
Setosphaeria turcica
SETTUDRAFT_167843
N
SNOG_16487
Stagonospora nodorum
SNOG_16487
N
SNOG_16487
Phaeosphaeria nodorum
SNOG_16487
N