tcf21 (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000016326 T037785_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.914 1.000
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.914 1.000
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.914 1.000
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.914 1.000
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.914 0.981
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.914 0.981
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.914 0.981
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.914 0.981
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.914 0.981
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.914 0.981
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.914 0.981
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.914 0.981
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.914 0.981
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000019420 bHLH 69 121

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI28321 Acyrthosiphon pisum ACYPI28321 I 0.000
A_06265 Schistosoma haematobium A_06265 I 0.000
CAD25284 Encephalitozoon cuniculi CAD25284 D 0.000
D915_03631 Fasciola hepatica D915_03631 I 0.000
EDEG_02526 Edhazardia aedis EDEG_02526 I 0.000
EHEL_040890 Encephalitozoon hellem EHEL_040890 I 0.000
EROM_040930 Encephalitozoon romaleae EROM_040930 I 0.000
CG15696 Drosophila melanogaster FBgn0038833 D 0.000
GA13896 Drosophila pseudoobscura FBgn0073928 I 0.000
GE25692 Drosophila yakuba FBgn0084486 I 0.000
GG24188 Drosophila erecta FBgn0085045 I 0.000
GF17994 Drosophila ananassae FBgn0095012 I 0.000
GH15916 Drosophila grimshawi FBgn0123387 I 0.000
GI10602 Drosophila mojavensis FBgn0133366 I 0.000
GL24283 Drosophila persimilis FBgn0161873 I 0.000
GM23140 Drosophila sechellia FBgn0178008 I 0.000
GJ22956 Drosophila virilis FBgn0210059 I 0.000
GK22474 Drosophila willistoni FBgn0224451 I 0.000
H311_03552 Anncaliia algerae H311_03552 I 0.000
LCUP001362 Lucilia cuprina LCUP001362 I 0.000
LotgiG169884 Lottia gigantea LotgiG169884 I 0.000
MDOA010523 Musca domestica MDOA010523 I 0.000
NEMVEDRAFT_v1g80394 Nematostella vectensis NEMVEDRAFT_v1g80394 D 0.000
Smp_000075 Schistosoma mansoni Smp_000075 I 0.000
TC015928 Tribolium castaneum TC015928 I 0.000
tetur05g02800 Tetranychus urticae tetur05g02800 I 0.000
TriadG51739 Trichoplax adhaerens TriadG51739 I 0.000
YQE_12606 Dendroctonus ponderosae YQE_12606 I 0.000