usf1 (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000005343 T037842_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
USF2
M04076_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF2_eDBD_HT-SELEX 		0.876 0.870
USF2
M08050_2.00 		Homo sapiens
NNVYCACGTGACHNNN
NNNDGTCACGTGRBNN		 ChIP-seq
Mathelier et al.(2014)
MA0526.2 		0.876 0.870
USF2
M07785_2.00 		Homo sapiens
NGTCACGTGRBSVVV
BBBSVYCACGTGACN		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF2_Stanford 		0.876 0.870
USF2
M07786_2.00 		Homo sapiens
NVGTCACGTGRBSVVV
BBBSVYCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF2_Stanford 		0.876 0.870
USF2
M07787_2.00 		Homo sapiens
RGTCACGTGVB
VBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_USF2_Stanford 		0.876 0.870
USF2
M07788_2.00 		Homo sapiens
NGTCACGTGRBSV
BSVYCACGTGACN		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF2_Stanford 		0.876 0.870
USF2
M07789_2.00 		Homo sapiens
RGTCACGTGRBSV
BSVYCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
K562_USF2_Stanford 		0.876 0.870
USF2
M08715_2.00 		Homo sapiens
NVGTCACGTGVBSVNNVNB
VNBNNBSVBCACGTGACBN		 Misc
Kulakovskiy et al.(2013)
USF2_HUMAN.H11MO.0.A 		0.876 0.870
USF2
M09812_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_01 		0.876 0.870
USF2
M09813_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_02 		0.876 0.870
USF2
M09814_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_Q6_01 		0.876 0.870
USF2
M09815_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_Q6 		0.876 0.870
USF2
M04077_2.00 		Homo sapiens
VNCAYGTGACN
NGTCACRTGNB		 SELEX
Yin et al.(2017)
USF2_eDBD_Methyl-HT-SELEX 		0.876 0.870
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000012820 bHLH 199 257
ENSTRUP00000012821 bHLH 189 247
ENSTRUP00000012822 bHLH 61 119
ENSTRUP00000012823 bHLH 190 248

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sakowv30025247m.g Saccoglossus kowalevskii Sakowv30025247m.g N
Sakowv30025249m.g Saccoglossus kowalevskii Sakowv30025249m.g N
Sakowv30025250m.g Saccoglossus kowalevskii Sakowv30025250m.g N
Sakowv30025251m.g Saccoglossus kowalevskii Sakowv30025251m.g N
Sakowv30030677m.g Saccoglossus kowalevskii Sakowv30030677m.g N
Sakowv30030678m.g Saccoglossus kowalevskii Sakowv30030678m.g N
Sakowv30030683m.g Saccoglossus kowalevskii Sakowv30030683m.g N
Sakowv30030684m.g Saccoglossus kowalevskii Sakowv30030684m.g N
Sakowv30030688m.g Saccoglossus kowalevskii Sakowv30030688m.g N
Sakowv30030692m.g Saccoglossus kowalevskii Sakowv30030692m.g N
Sakowv30030694m.g Saccoglossus kowalevskii Sakowv30030694m.g N
Sakowv30030697m.g Saccoglossus kowalevskii Sakowv30030697m.g N
Sakowv30030700m.g Saccoglossus kowalevskii Sakowv30030700m.g N
Sakowv30030701m.g Saccoglossus kowalevskii Sakowv30030701m.g N
Sakowv30030703m.g Saccoglossus kowalevskii Sakowv30030703m.g N
Sakowv30030705m.g Saccoglossus kowalevskii Sakowv30030705m.g N
Sakowv30037158m.g Saccoglossus kowalevskii Sakowv30037158m.g N
Sakowv30037159m.g Saccoglossus kowalevskii Sakowv30037159m.g N
Sakowv30037160m.g Saccoglossus kowalevskii Sakowv30037160m.g N
Sakowv30037162m.g Saccoglossus kowalevskii Sakowv30037162m.g N
Sakowv30037163m.g Saccoglossus kowalevskii Sakowv30037163m.g N
Sakowv30037164m.g Saccoglossus kowalevskii Sakowv30037164m.g N
Sakowv30037166m.g Saccoglossus kowalevskii Sakowv30037166m.g N
Sakowv30037167m.g Saccoglossus kowalevskii Sakowv30037167m.g N
Sakowv30037168m.g Saccoglossus kowalevskii Sakowv30037168m.g N
Sakowv30037169m.g Saccoglossus kowalevskii Sakowv30037169m.g N
Sakowv30037170m.g Saccoglossus kowalevskii Sakowv30037170m.g N