arntl1a (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000008391 T037863_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000021009 bHLH 77 130
ENSTRUP00000021010 bHLH 61 114
ENSTRUP00000021011 bHLH 74 127
ENSTRUP00000021012 bHLH 72 125
ENSTRUP00000021013 bHLH 66 119

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
znf652 Danio rerio ENSDARG00000062302 I 0.000
ZNF652 Echinops telfairi ENSETEG00000017186 N 0.000
Zfp652 Mus musculus ENSMUSG00000075595 D 0.000
ENSNLEG00000027071 Nomascus leucogenys ENSNLEG00000027071 N 0.000
ZNF652 Sorex araneus ENSSARG00000000812 N 0.000
ENSSHAG00000002263 Sarcophilus harrisii ENSSHAG00000002263 I 0.000
ZNF652 Tetraodon nigroviridis ENSTNIG00000002892 N 0.000
ENSTSYG00000010857 Tarsius syrichta ENSTSYG00000010857 N 0.000
Ogr13999 Ophisaurus gracilis Ogr13999 N 0.000