CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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neurod2
(
Takifugu rubripes
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTRUG00000012238
T037886_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.870
0.865
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.870
0.865
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.870
0.865
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.870
0.865
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.870
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000030987
bHLH
105
157
RRMKANTRERIRMHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYILTLG
Links
Other
bHLH
family TFs
Other
Takifugu rubripes
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECANG7_05482
Echinococcus canadensis
ECANG7_05482
N
EmuJ_000768400
Echinococcus multilocularis
EmuJ_000768400
N
GPLIN_000941800
Globodera pallida
GPLIN_000941800
I
MhA1_Contig993.frz3.gene8
Meloidogyne hapla
MhA1_Contig993.frz3.gene8
N
Minc15230
Meloidogyne incognita
Minc15230
N
TASK_0000901601
Taenia asiatica
TASK_0000901601
N
TsM_000643400
Taenia solium
TsM_000643400
N
TTAC_0000435501
Hydatigera taeniaeformis
TTAC_0000435501
N