MYF6 (Vicugna pacos)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSVPAG00000001926 T038062_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Myf6
M00120_2.00 		Mus musculus
NCRNNTGNY
RNCANNYGN		 PBM
Badis et al.(2009)
Myf6_3824 		0.914 0.981
Myf6
M01742_2.00 		Mus musculus
RACAGHTGH
DCADCTGTY		 PBM
Weirauch et al.(2014)
pTH5099 		0.914 0.981
MYF6
M02780_2.00 		Homo sapiens
AACARCTGTY
RACAGYTGTT		 SELEX
Jolma et al.(2013)
MYF6_1 		0.914 0.981
MYF6
M04084_2.00 		Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV		 SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1 		0.914 0.981
MYF6
M04085_2.00 		Homo sapiens
NRACASSTGWYV
BRWCASSTGTYN		 SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2 		0.914 0.981
MYF6
M05831_2.00 		Homo sapiens
BRACAKNTGNY
RNCANMTGTYV		 SMiLE-seq
Isakova et al.(2017)
MYF6 		0.914 0.981
MYF6
M08717_2.00 		Homo sapiens
CASCTGC
GCAGSTG		 Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C 		0.914 0.981
Myf6
M08767_2.00 		Mus musculus
CASCTGC
GCAGSTG		 Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C 		0.914 0.981
MYF6
M09820_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MRF4_Q3 		0.914 0.981
MYF6
M04086_2.00 		Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV		 SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1 		0.914 0.981
MYF6
M04087_2.00 		Homo sapiens
BAACASSTGWYV
BRWCASSTGTTV		 SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2 		0.914 0.981
MYOG
M04098_2.00 		Homo sapiens
BRACAGCTGWCR
YGWCAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1 		0.883 0.865
MYOG
M04099_2.00 		Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN		 SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2 		0.883 0.865
MYOG
M04102_2.00 		Homo sapiens
NRACARCTGWCR
YGWCAGYTGTYN		 SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1 		0.883 0.865
MYOG
M04103_2.00 		Homo sapiens
NAACARYTGTYN
NRACARYTGTTN		 SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2 		0.883 0.865
Myog
M08061_2.00 		Mus musculus
RRCAGCTGVNN
NNBCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0500.1 		0.883 0.865
MYOG
M08721_2.00 		Homo sapiens
BHVCAGCTGYYNB
VNRRCAGCTGBDV		 Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B 		0.883 0.865
Myog
M08755_2.00 		Mus musculus
BHVCAGCTGYYNB
VNRRCAGCTGBDV		 Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A 		0.883 0.865
Myog
M09469_2.00 		Mus musculus
RACAGCTG
CAGCTGTY		 Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024 		0.883 0.865
MYOG
M09829_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01 		0.883 0.865
MYOG
M09830_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOGENIN_Q6 		0.883 0.865
MYOG
M04100_2.00 		Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1 		0.883 0.865
MYOG
M04101_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2 		0.883 0.865
MYOG
M04104_2.00 		Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1 		0.883 0.865
MYOG
M04105_2.00 		Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN		 SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2 		0.883 0.865
Myf5
M09463_2.00 		Mus musculus
NRRCAGCTGY
RCAGCTGYYN		 Misc
Heinz et al.(2010)
GM-Myf5_GSE24852 		0.841 0.808
MYF5
M09821_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYF5_Q6 		0.841 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000001779 bHLH 94 145

Links

Other bHLH family TFs
Other Vicugna pacos TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000014396 Ailuropoda melanoleuca ENSAMEG00000014396 N
THAP6 Bos taurus ENSBTAG00000007190 N
THAP6 Canis familiaris ENSCAFG00000008331 N
THAP6 Choloepus hoffmanni ENSCHOG00000011670 N
THAP6 Callithrix jacchus ENSCJAG00000019942 N
ENSCSAG00000004714 Chlorocebus sabaeus ENSCSAG00000004714 N
THAP6 Dasypus novemcinctus ENSDNOG00000039501 N
ENSDORG00000003942 Dipodomys ordii ENSDORG00000003942 N
THAP6 Equus caballus ENSECAG00000015765 N
THAP6 Erinaceus europaeus ENSEEUG00000009035 N
THAP6 Felis catus ENSFCAG00000008509 N
THAP6 Homo sapiens ENSG00000174796 N
THAP6 Gorilla gorilla ENSGGOG00000002489 N
THAP6 Loxodonta africana ENSLAFG00000017346 N
THAP6 Myotis lucifugus ENSMLUG00000012704 N
THAP6 Macaca mulatta ENSMMUG00000009180 N
ENSMPUG00000009068 Mustela putorius furo ENSMPUG00000009068 N
ENSNLEG00000007973 Nomascus leucogenys ENSNLEG00000007973 N
THAP6 Ornithorhynchus anatinus ENSOANG00000006921 N
ENSOARG00000015330 Ovis aries ENSOARG00000015330 N
THAP6 Oryctolagus cuniculus ENSOCUG00000000368 N
THAP6 Otolemur garnettii ENSOGAG00000011799 N
THAP6 Ochotona princeps ENSOPRG00000012386 N
ENSP00000309007 Macaca fascicularis ENSP00000309007 N
ENSP00000309007-D1 Bos grunniens ENSP00000309007-D1 N
ENSPANG00000016871 Papio anubis ENSPANG00000016871 N
THAP6 Procavia capensis ENSPCAG00000016797 N
ENSPPYG00000014843 Pongo abelii ENSPPYG00000014843 N
ENSPSIG00000008533 Pelodiscus sinensis ENSPSIG00000008533 N
THAP6 Pan troglodytes ENSPTRG00000039569 N
THAP6 Pteropus vampyrus ENSPVAG00000010162 N
Thap6 Rattus norvegicus ENSRNOG00000058724 N
THAP6 Sorex araneus ENSSARG00000003532 N
THAP6 Sus scrofa ENSSSCG00000029348 N
ENSSTOG00000012959 Ictidomys tridecemlineatus ENSSTOG00000012959 N
THAP6 Tupaia belangeri ENSTBEG00000011898 N
THAP6 Tursiops truncatus ENSTTRG00000013788 N
THAP6 Vicugna pacos ENSVPAG00000010703 N
Myotis_brandtii_THAP6_10008862 Myotis brandtii Myotis_brandtii_THAP6_10008862 N