fgenesh2_kg.8__734__AT5G48560.1 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.8__734__AT5G48560.1 T039177_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.914 1.000
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.901 0.882
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.901 0.882
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.888 0.922
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.888 0.922
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.875 0.902
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.875 0.882
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.875 0.882
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.875 0.882
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.868 0.804
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.864 0.824
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.864 0.804
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.864 0.804
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.8__734__AT5G48560.1 bHLH 306 356

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

884 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_067850 Acremonium chrysogenum ACRE_067850 I 0.000
BBA_09189 Beauveria bassiana BBA_09189 I 0.000
Bcin08g00160 Botrytis cinerea Bcin08g00160 I 0.000
BGHDH14_bgh05094 Blumeria graminis BGHDH14_bgh05094 I 0.000
CCM_09080 Cordyceps militaris CCM_09080 I 0.000
CFIO01_10198 Colletotrichum fioriniae CFIO01_10198 I 0.000
CH063_08735 Colletotrichum higginsianum CH063_08735 I 0.000
CHGG_07364 Chaetomium globosum CHGG_07364 I 0.000
CMQ_7699 Grosmannia clavigera CMQ_7699 I 0.000
CPUR_08028 Claviceps purpurea CPUR_08028 I 0.000
CSUB01_05898 Colletotrichum sublineola CSUB01_05898 I 0.000
CTHT_0068480 Chaetomium thermophilum CTHT_0068480 I 0.000
DOTSEDRAFT_68376 Dothistroma septosporum DOTSEDRAFT_68376 I 0.000
estExt_Genewise1.C_12176 Mycosphaerella fijiensis estExt_Genewise1.C_12176 I 0.000
estExt_Genewise1Plus.C_13371 Cryphonectria parasitica estExt_Genewise1Plus.C_13371 I 0.000
estExt_Genewise1Plus.C_140234 Neurospora discreta estExt_Genewise1Plus.C_140234 I 0.000
EV44_g6268 Erysiphe necator EV44_g6268 I 0.000
F503_04220 Ophiostoma piceae uamh F503_04220 I 0.000
FFUJ_13826 Fusarium fujikuroi FFUJ_13826 N 0.000
fgenesh1_pg.sca_82_chr10_2_0000236 Nectria haematococca fgenesh1_pg.sca_82_chr10_2_0000236 N 0.000
FOXG_04427 Fusarium oxysporum FOXG_04427 N 0.000
FVEG_07545 Fusarium verticillioides FVEG_07545 N 0.000
GGTG_06006 Gaeumannomyces graminis GGTG_06006 I 0.000
GLRG_01145 Colletotrichum graminicola GLRG_01145 I 0.000
GMDG_01905 Pseudogymnoascus destructans GMDG_01905 I 0.000
gw1.14.468.1 Nectria haematococca gw1.14.468.1 I 0.000
MAJ_06898 Metarhizium majus MAJ_06898 I 0.000
MAM_04875 Metarhizium album MAM_04875 I 0.000
MANI_011912 Metarhizium anisopliae MANI_011912 I 0.000
MAPG_04263 Magnaporthe poae MAPG_04263 I 0.000
MBM_09456 Marssonina brunnea MBM_09456 I 0.000
MBR_05015 Metarhizium brunneum MBR_05015 I 0.000
MGG_05343 Magnaporthe oryzae MGG_05343 I 0.000
MGU_01655 Metarhizium guizhouense MGU_01655 I 0.000
MYCFIDRAFT_127068 Pseudocercospora fijiensis MYCFIDRAFT_127068 I 0.000
MYCTH_2301920 Myceliophthora thermophila MYCTH_2301920 I 0.000
col-26 Neurospora crassa NCU07788 D 0.000
NechaG22260 Fusarium solani NechaG22260 I 0.000
NechaG85633 Fusarium solani NechaG85633 N 0.000
NEUTE1DRAFT_59081 Neurospora tetrasperma NEUTE1DRAFT_59081 I 0.000
OCS_01944 Ophiocordyceps sinensis OCS_01944 I 0.000
OIDMADRAFT_45538 Oidiodendron maius OIDMADRAFT_45538 I 0.000
PFICI_10998 Pestalotiopsis fici PFICI_10998 I 0.000
PODANS_2_4060 Podospora anserina PODANS_2_4060 I 0.000
S40285_00097 Stachybotrys chlorohalonata S40285_00097 I 0.000
S40288_01569 Stachybotrys chartarum S40288_01569 I 0.000
S40288_10011 Stachybotrys chartarum S40288_10011 N 0.000
SAPIO_CDS0393 Scedosporium apiospermum SAPIO_CDS0393 I 0.000
SBOR_6099 Sclerotinia borealis SBOR_6099 I 0.000
SEPMUDRAFT_146091 Sphaerulina musiva SEPMUDRAFT_146091 I 0.000
SMAC_08231 Sordaria macrospora SMAC_08231 I 0.000
THITE_2108095 Thielavia terrestris THITE_2108095 I 0.000
TRIATDRAFT_11573 Trichoderma atroviride TRIATDRAFT_11573 I 0.000
TRIREDRAFT_52368 Trichoderma reesei TRIREDRAFT_52368 I 0.000
TRIVIDRAFT_156582 Trichoderma virens TRIVIDRAFT_156582 I 0.000
UCREL1_10245 Eutypa lata UCREL1_10245 I 0.000
UV8b_5300 Ustilaginoidea virens UV8b_5300 I 0.000
V499_05963 Pseudogymnoascus pannorum V499_05963 I 0.000
VDAG_04640 Verticillium dahliae VDAG_04640 I 0.000
VDBG_09402 Verticillium albo atrum VDBG_09402 I 0.000
VDBG_09402 Verticillium alfalfae VDBG_09402 I 0.000
VHEMI08540 Torrubiella hemipterigena VHEMI08540 I 0.000
X797_001512 Metarhizium robertsii X797_001512 I 0.000