CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC01G39450
(
Oryza punctata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
OPUNC01G39450
T042736_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.861
0.843
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC01G39450.1
bHLH
160
210
ATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQ
OPUNC01G39450.2
bHLH
163
213
ATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQ
Links
Other
bHLH
family TFs
Other
Oryza punctata
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0019s02060
Populus trichocarpa
POPTR_0019s02060
N
XM_002332506.1
Populus trichocarpa
POPTR_0019s02070
N
POPTR_0019s02180
Populus trichocarpa
POPTR_0019s02180
N
POPTR_0019s02190
Populus trichocarpa
POPTR_0019s02190
N
POPTR_0019s03970
Populus trichocarpa
POPTR_0019s03970
N
POPTR_0031s00210
Populus trichocarpa
POPTR_0031s00210
N
POPTR_0060s00240
Populus trichocarpa
POPTR_0060s00240
N
POPTR_0123s00220
Populus trichocarpa
POPTR_0123s00220
N
POPTR_0123s00230
Populus trichocarpa
POPTR_0123s00230
N
POPTR_0190s00220
Populus trichocarpa
POPTR_0190s00220
N
SapurV1A.0436s0010
Salix purpurea
SapurV1A.0436s0010
N
SapurV1A.0436s0020
Salix purpurea
SapurV1A.0436s0020
N
SapurV1A.0436s0030
Salix purpurea
SapurV1A.0436s0030
N
SapurV1A.0436s0070
Salix purpurea
SapurV1A.0436s0070
N
SapurV1A.0436s0160
Salix purpurea
SapurV1A.0436s0160
N
SapurV1A.0880s0030
Salix purpurea
SapurV1A.0880s0030
N
SapurV1A.1254s0010
Salix purpurea
SapurV1A.1254s0010
N
SapurV1A.1525s0010
Salix purpurea
SapurV1A.1525s0010
N
SapurV1A.1614s0020
Salix purpurea
SapurV1A.1614s0020
N
SapurV1A.1860s0010
Salix purpurea
SapurV1A.1860s0010
N
SapurV1A.2141s0020
Salix purpurea
SapurV1A.2141s0020
N
SapurV1A.2188s0010
Salix purpurea
SapurV1A.2188s0010
N
SapurV1A.4753s0010
Salix purpurea
SapurV1A.4753s0010
N