CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

PGSC0003DMG400018332 *(Solanum tuberosum)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	PGSC0003DMG400018332	T043472_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BHLH14 M09785_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AT4G00870_01	0.884	0.837
PK18474.1 M01127_2.00	Cannabis sativa	NRCACGTGCN	NGCACGTGYN	PBM Lambert et al.(2019) pTH10273	0.870	0.857
PK18474.1 M01768_2.00	Cannabis sativa	NCACGWK	MWCGTGN	PBM Weirauch et al.(2014) pTH9589	0.870	0.857
MYC2 M01699_2.00	Arabidopsis thaliana	NNCACGTGNN	NNCACGTGNN	PBM Weirauch et al.(2014) pTH8083	0.870	0.837
MYC3 M01712_2.00	Arabidopsis thaliana	MWYGTGNNNN	NNNNCACRWK	PBM Weirauch et al.(2014) pTH8854	0.870	0.837
MYC4 M01707_2.00	Arabidopsis thaliana	NNCACGTGNN	NNCACGTGNN	PBM Weirauch et al.(2014) pTH8260	0.870	0.816
BHLH13 M01698_2.00	Arabidopsis thaliana	MCACGTGV	BCACGTGK	PBM Weirauch et al.(2014) pTH7565	0.857	0.878
OS01G0235700 M09894_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BHLH66_01	0.846	0.776
BHLH28 M06742_2.00	Arabidopsis thaliana	NNNYGTACGGAH	DTCCGTACRNNN	Dap-seq OMalley et al.(2016) bHLH28_col_a	0.844	0.837
For this family, TFs with SR scores > 0.838* will likely have a similar motif*