CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHUM129440
(
Pediculus humanus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
PHUM129440
T043593_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Fer3
M05993_2.00
Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC
B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937
0.914
0.981
FERD3L
M04140_2.00
Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1
0.890
0.904
FERD3L
M04141_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2
0.890
0.904
FERD3L
M04142_2.00
Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1
0.890
0.904
FERD3L
M04143_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2
0.890
0.904
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM129440-PA
bHLH
82
134
QRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYISFMA
Links
Other
bHLH
family TFs
Other
Pediculus humanus
TFs
123 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TEAD1
Anolis carolinensis
ENSACAG00000004642
I
ENSAMXG00000010081
Astyanax mexicanus
ENSAMXG00000010081
I
TEAD1
Canis familiaris
ENSCAFG00000007976
I
TEAD1
Choloepus hoffmanni
ENSCHOG00000001087
N
TEAD1
Callithrix jacchus
ENSCJAG00000010263
I
Tead1
Dipodomys ordii
ENSDORG00000013529
N
TEAD1
Equus caballus
ENSECAG00000008332
I
TEAD1
Erinaceus europaeus
ENSEEUG00000012549
N
TEAD1
Homo sapiens
ENSG00000187079
D
TEAD4
Homo sapiens
ENSG00000197905
D
tead1b
Gasterosteus aculeatus
ENSGACG00000015715
I
TEAD1
Gallus gallus
ENSGALG00000005415
I
TEAD1
Gorilla gorilla
ENSGGOG00000003412
N
ENSLOCG00000004054
Lepisosteus oculatus
ENSLOCG00000004054
I
ENSMEUG00000006301
Macropus eugenii
ENSMEUG00000006301
N
TEAD1
Macaca mulatta
ENSMMUG00000010875
N
Tead4
Mus musculus
ENSMUSG00000030353
D
Tead1
Mus musculus
ENSMUSG00000055320
D
ENSNLEG00000017672
Nomascus leucogenys
ENSNLEG00000017672
N
TEAD1
Oryctolagus cuniculus
ENSOCUG00000007955
I
ENSONIG00000005991
Oreochromis niloticus
ENSONIG00000005991
N
tead1b
Oryzias latipes
ENSORLG00000007439
I
ENSP00000355332
Macaca fascicularis
ENSP00000355332
N
ENSPFOG00000012196
Poecilia formosa
ENSPFOG00000012196
N
ENSPPYG00000003475
Pongo abelii
ENSPPYG00000003475
I
TEAD1
Pan troglodytes
ENSPTRG00000039896
N
TEAD1
Pteropus vampyrus
ENSPVAG00000001503
I
Tead1
Rattus norvegicus
ENSRNOG00000015488
I
ENSTSYG00000001514
Tarsius syrichta
ENSTSYG00000001514
N
TEAD1
Tursiops truncatus
ENSTTRG00000006621
N
TEAD1
Vicugna pacos
ENSVPAG00000005288
N
ENSXMAG00000003088
Xiphophorus maculatus
ENSXMAG00000003088
N
SMAR011013
Strigamia maritima
SMAR011013
I