CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

POPTR_0009s06910 *(Populus trichocarpa)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	POPTR_0009s06910	T043850_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
OS08G0506700 M01755_2.00	Oryza sativa	NCCACTTGN	NCAAGTGGN	PBM Weirauch et al.(2014) pTH8547	0.900	0.918
BHLH122 M06724_2.00	Arabidopsis thaliana	NNDNCMACTTGNNH	DNNCAAGTKGNHNN	Dap-seq OMalley et al.(2016) bHLH122_col100_a	0.877	0.878
BHLH122 M06725_2.00	Arabidopsis thaliana	DNCMACTTGYN	NRCAAGTKGNH	Dap-seq OMalley et al.(2016) bHLH122_colamp_a	0.877	0.878
BHLH80 M06722_2.00	Arabidopsis thaliana	DNCMACTTGCH	DGCAAGTKGNH	Dap-seq OMalley et al.(2016) bHLH80_col_a	0.858	0.816
BHLH80 M06723_2.00	Arabidopsis thaliana	DKCMACTTGCA	TGCAAGTKGMH	Dap-seq OMalley et al.(2016) bHLH80_colamp_a	0.858	0.816
AT2G42280 M06733_2.00	Arabidopsis thaliana	DNCMACTTGYH	DRCAAGTKGNH	Dap-seq OMalley et al.(2016) bHLH130_col_a	0.854	0.918
For this family, TFs with SR scores > 0.838* will likely have a similar motif*