CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0013s13340
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0013s13340
T043888_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0013s13340.1
bHLH
20
79
TKTERKIIEKNRRNQMKTLYSKLNSLLPNQNFKEPQPLPDQIDEAISHIKSLEEKLKKAK
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr5.LjT18P14.110.nd
Lotus japonicus
chr5.LjT18P14.110.nd
N
0.841
POPTR_0019s05030
Populus trichocarpa
POPTR_0019s05030
N
0.844
POPTR_0019s13070
Populus trichocarpa
POPTR_0019s13070
N
0.860
POPTR_0019s13090
Populus trichocarpa
POPTR_0019s13090
N
0.860
SapurV1A.0685s0010
Salix purpurea
SapurV1A.0685s0010
N
0.889
SapurV1A.1023s0070
Salix purpurea
SapurV1A.1023s0070
N
0.871
SapurV1A.2223s0040
Salix purpurea
SapurV1A.2223s0040
N
0.889