CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SINV21956
(
Solenopsis invicta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
SINV21956
T044865_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TAL1
M08734_2.00
Homo sapiens
BSTTATCWSNNNNNNVCVV
BBGBNNNNNNSWGATAASV
Misc
Kulakovskiy et al.(2013)
TAL1_HUMAN.H11MO.0.A
0.855
0.808
Tal1
M08759_2.00
Mus musculus
BYKBNNNNNNVWGATAAVVN
NBBTTATCWBNNNNNNVMRV
Misc
Kulakovskiy et al.(2013)
TAL1_MOUSE.H11MO.0.A
0.855
0.808
Tal1
M09471_2.00
Mus musculus
NVCWKMWG
CWKMWGBN
Misc
Heinz et al.(2010)
HPC7-Scl_GSE13511
0.855
0.808
Tal1
M09472_2.00
Mus musculus
YTATCWSNNNNNNVCAGVHN
NDBCTGBNNNNNNSWGATAR
Misc
Heinz et al.(2010)
Ter119-SCL_GSE18720
0.855
0.808
TAL1
M09870_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TAL1_01
0.855
0.808
TAL1
M09871_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TAL1_Q6_01
0.855
0.808
TAL1
M09872_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TAL1_Q6
0.855
0.808
LYL1
M08714_2.00
Homo sapiens
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB
Misc
Kulakovskiy et al.(2013)
LYL1_HUMAN.H11MO.0.A
0.855
0.769
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SINV21956-PA
bHLH
1227
1279
RKLFTNSRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRMAIRYIRLLS
Links
Other
bHLH
family TFs
Other
Solenopsis invicta
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG001228.1
Alligator sinensis
Alligator_sinensis_CCG001228.1
N
Cmyd_10002847
Chelonia mydas
Cmyd_10002847
N
TCF24
Anolis carolinensis
ENSACAG00000016461
N
ENSAMEG00000001827
Ailuropoda melanoleuca
ENSAMEG00000001827
N
ENSAMEG00000012533
Ailuropoda melanoleuca
ENSAMEG00000012533
N
ENSAMXG00000013680
Astyanax mexicanus
ENSAMXG00000013680
N
TCF23
Bos taurus
ENSBTAG00000014813
N
TCF24
Canis familiaris
ENSCAFG00000029615
N
TCF23
Canis familiaris
ENSCAFG00000030192
N
TCF23
Callithrix jacchus
ENSCJAG00000001198
N
ENSCPOG00000003785
Cavia porcellus
ENSCPOG00000003785
N
TCF24
Cavia porcellus
ENSCPOG00000014534
N
TCF24
Danio rerio
ENSDARG00000086944
N
TCF24
Dasypus novemcinctus
ENSDNOG00000045736
N
Tcf23
Dipodomys ordii
ENSDORG00000014403
N
TCF23
Equus caballus
ENSECAG00000021374
N
TCF24
Homo sapiens
ENSG00000261787
N
ENSGACG00000002911
Gasterosteus aculeatus
ENSGACG00000002911
N
TCF24
Gorilla gorilla
ENSGGOG00000027653
N
ENSLACG00000004204
Latimeria chalumnae
ENSLACG00000004204
N
ENSLACG00000014458
Latimeria chalumnae
ENSLACG00000014458
N
TCF23
Loxodonta africana
ENSLAFG00000014587
N
ENSLOCG00000004611
Lepisosteus oculatus
ENSLOCG00000004611
N
ENSMEUG00000010665
Macropus eugenii
ENSMEUG00000010665
N
TCF23
Monodelphis domestica
ENSMODG00000015714
N
ENSMODG00000024958
Monodelphis domestica
ENSMODG00000024958
N
Tcf23
Mus musculus
ENSMUSG00000006642
N
Tcf24
Mus musculus
ENSMUSG00000099032
N
ENSNLEG00000010898
Nomascus leucogenys
ENSNLEG00000010898
N
TCF24
Ornithorhynchus anatinus
ENSOANG00000002317
N
TCF23
Ornithorhynchus anatinus
ENSOANG00000003936
N
ENSOARG00000000076
Ovis aries
ENSOARG00000000076
N
ENSOARG00000019168
Ovis aries
ENSOARG00000019168
N
ENSOCUG00000008655
Oryctolagus cuniculus
ENSOCUG00000008655
N
ENSOPRG00000010556
Ochotona princeps
ENSOPRG00000010556
N
ENSP00000296096-D1
Bos grunniens
ENSP00000296096-D1
N
ENSPANG00000017721
Papio anubis
ENSPANG00000017721
N
ENSPFOG00000004192
Poecilia formosa
ENSPFOG00000004192
N
ENSPSIG00000014305
Pelodiscus sinensis
ENSPSIG00000014305
N
ENSPVAG00000015152
Pteropus vampyrus
ENSPVAG00000015152
N
Tcf23
Rattus norvegicus
ENSRNOG00000025736
N
Tcf24
Rattus norvegicus
ENSRNOG00000052668
N
ENSSHAG00000012462
Sarcophilus harrisii
ENSSHAG00000012462
N
TCF23
Sus scrofa
ENSSSCG00000027409
N
ENSSTOG00000007256
Ictidomys tridecemlineatus
ENSSTOG00000007256
N
ENSSTOG00000015523
Ictidomys tridecemlineatus
ENSSTOG00000015523
N
TCF24
Takifugu rubripes
ENSTRUG00000009376
N
TCF23
Tursiops truncatus
ENSTTRG00000005255
N
TCF24
Tursiops truncatus
ENSTTRG00000017150
N
e_gw.78.156.1
Branchiostoma floridae
e_gw.78.156.1
N
e_gw.78.157.1
Branchiostoma floridae
e_gw.78.157.1
N
Gfo_R001999
Geospiza fortis
Gfo_R001999
N
gw.78.158.1
Branchiostoma floridae
gw.78.158.1
N
LotgiG70568
Lottia gigantea
LotgiG70568
N
Ogr10845
Ophisaurus gracilis
Ogr10845
N
Pvit_15007
Pogona vitticeps
Pvit_15007
N
SPU_016445
Strongylocentrotus purpuratus
SPU_016445
N