SMAR008523 (Strigamia maritima)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 SMAR008523 T044926_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.858 0.769
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.858 0.769
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.858 0.769
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.858 0.769
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.858 0.769
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.858 0.769
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.858 0.769
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.858 0.769
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.855 0.731
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.855 0.731
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.855 0.731
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.855 0.731
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.855 0.731
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.855 0.731
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.855 0.731
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.855 0.731
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.855 0.731
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.855 0.731
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.855 0.731
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.855 0.731
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.855 0.731
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.855 0.731
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.855 0.712
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.855 0.712
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.855 0.712
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR008523-PA bHLH 471 524

Links

Other bHLH family TFs
Other Strigamia maritima TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_206080 Agaricus bisporus AGABI2DRAFT_206080 N 0.000
CC1G_14832 Coprinopsis cinerea CC1G_14832 N 0.000
CERSUDRAFT_93268 Ceriporiopsis subvermispora CERSUDRAFT_93268 N 0.000
fgenesh1_pg.C_scaffold_3000282 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000282 N 0.000
FIBRA_08530 Fibroporia radiculosa FIBRA_08530 N 0.000
FOMPIDRAFT_99099 Fomitopsis pinicola FOMPIDRAFT_99099 N 0.000
GALMADRAFT_240824 Galerina marginata GALMADRAFT_240824 N 0.000
GLOTRDRAFT_138211 Gloeophyllum trabeum GLOTRDRAFT_138211 N 0.000
GYMLUDRAFT_244445 Gymnopus luxurians GYMLUDRAFT_244445 N 0.000
HETIRDRAFT_478421 Heterobasidion irregulare HETIRDRAFT_478421 N 0.000
K443DRAFT_672061 Laccaria amethystina K443DRAFT_672061 N 0.000
LACBIDRAFT_305525 Laccaria bicolor LACBIDRAFT_305525 N 0.000
M378DRAFT_8120 Amanita muscaria M378DRAFT_8120 N 0.000
M404DRAFT_882883 Pisolithus tinctorius M404DRAFT_882883 N 0.000
M413DRAFT_442898 Hebeloma cylindrosporum M413DRAFT_442898 N 0.000
Moror_14084 Moniliophthora roreri Moror_14084 N 0.000
MPER_01314 Moniliophthora perniciosa MPER_01314 N 0.000
PAXRUDRAFT_832240 Paxillus rubicundulus PAXRUDRAFT_832240 N 0.000
PHACADRAFT_32832 Phanerochaete carnosa PHACADRAFT_32832 N 0.000
PHLGIDRAFT_66452 Phlebiopsis gigantea PHLGIDRAFT_66452 N 0.000
PILCRDRAFT_819897 Piloderma croceum PILCRDRAFT_819897 N 0.000
PLEOSDRAFT_1105666 Pleurotus ostreatus PLEOSDRAFT_1105666 N 0.000
POSPLDRAFT_95924 Postia placenta POSPLDRAFT_95924 N 0.000
POSPLDRAFT_96456 Postia placenta POSPLDRAFT_96456 N 0.000
SCHCODRAFT_245859 Schizophyllum commune SCHCODRAFT_245859 N 0.000
SCLCIDRAFT_1214941 Scleroderma citrinum SCLCIDRAFT_1214941 N 0.000
SERLA73DRAFT_162624 Serpula lacrymans SERLA73DRAFT_162624 N 0.000