CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_002737
(
Theobroma cacao
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
TCM_002737
T045336_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC
GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.914
0.960
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN
NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.901
0.880
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.901
0.880
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC
GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.888
0.940
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.888
0.920
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH
DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.875
0.900
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.875
0.900
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY
RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.875
0.900
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.875
0.880
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN
NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.868
0.800
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.864
0.840
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.864
0.820
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT
ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.864
0.820
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX93799
bHLH
382
431
TDSHSLAERVRREKISERMKLLQNLVPGCNKVTGKALMLDEIINYVQSLQ
Links
Other
bHLH
family TFs
Other
Theobroma cacao
TFs
884 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03859
Capronia coronata
A1O1_03859
I
A1O1_05481
Capronia coronata
A1O1_05481
I
A1O3_06529
Capronia epimyces
A1O3_06529
I
A1O5_02846
Cladophialophora psammophila
A1O5_02846
I
A1O5_07259
Cladophialophora psammophila
A1O5_07259
I
A1O7_06866
Cladophialophora yegresii
A1O7_06866
I
A1O7_09850
Cladophialophora yegresii
A1O7_09850
I
A1O9_01300
Exophiala aquamarina
A1O9_01300
I
A1O9_09618
Exophiala aquamarina
A1O9_09618
I
AB08968.1
Alternaria brassicicola
AB08968.1
I
ACRE_056860
Acremonium chrysogenum
ACRE_056860
I
AOL_s00079g257
Arthrobotrys oligospora
AOL_s00079g257
I
ARB_03451
Arthroderma benhamiae
ARB_03451
I
ARB_05352
Arthroderma benhamiae
ARB_05352
I
BAUCODRAFT_23289
Baudoinia compniacensis
BAUCODRAFT_23289
I
BBA_03650
Beauveria bassiana
BBA_03650
I
BBA_06721
Beauveria bassiana
BBA_06721
I
Bcin06g02160
Botrytis cinerea
Bcin06g02160
I
Bcin13g03000
Botrytis cinerea
Bcin13g03000
I
BGHDH14_bgh00909
Blumeria graminis
BGHDH14_bgh00909
I
CADAFLAG00007235
Aspergillus flavus
CADAFLAG00007235
I
AFUA_2G02540
Aspergillus fumigatus
CADAFUAG00003598
I
CADANGAG00005877
Aspergillus niger
CADANGAG00005877
I
ANIA_04562
Aspergillus nidulans
CADANIAG00005876
D
ATEG_06925
Aspergillus terreus
CADATEAG00003197
I
CC1G_08635
Coprinopsis cinerea
CC1G_08635
N
CCM_03249
Cordyceps militaris
CCM_03249
I
CFIO01_10839
Colletotrichum fioriniae
CFIO01_10839
I
CGGC5_11283
Colletotrichum gloeosporioides
CGGC5_11283
I
CGGC5_5165
Colletotrichum gloeosporioides
CGGC5_5165
I
CH063_04138
Colletotrichum higginsianum
CH063_04138
I
CH063_06068
Colletotrichum higginsianum
CH063_06068
I
CHGG_06554
Chaetomium globosum
CHGG_06554
I
CIMG_01382
Coccidioides immitis
CIMG_01382
I
CIMG_01816
Coccidioides immitis
CIMG_01816
I
CMQ_4918
Grosmannia clavigera
CMQ_4918
I
Cob_04988
Colletotrichum orbiculare
Cob_04988
I
Cob_11788
Colletotrichum orbiculare
Cob_11788
I
COCC4DRAFT_125759
Bipolaris maydis
COCC4DRAFT_125759
I
COCCADRAFT_29461
Bipolaris zeicola
COCCADRAFT_29461
I
COCMIDRAFT_108054
Bipolaris oryzae
COCMIDRAFT_108054
I
COCSADRAFT_86485
Bipolaris sorokiniana
COCSADRAFT_86485
I
COCVIDRAFT_20419
Bipolaris victoriae
COCVIDRAFT_20419
I
COCVIDRAFT_30018
Bipolaris victoriae
COCVIDRAFT_30018
I
CPC735_046790
Coccidioides posadasii
CPC735_046790
I
CPC735_050410
Coccidioides posadasii
CPC735_050410
I
CPUR_01989
Claviceps purpurea
CPUR_01989
I
CSUB01_01966
Colletotrichum sublineola
CSUB01_01966
I
CSUB01_03547
Colletotrichum sublineola
CSUB01_03547
I
CTHT_0012120
Chaetomium thermophilum
CTHT_0012120
I
CY34DRAFT_809202
Suillus luteus
CY34DRAFT_809202
N
DOTSEDRAFT_48303
Dothistroma septosporum
DOTSEDRAFT_48303
I
EPUS_07397
Endocarpon pusillum
EPUS_07397
I
estExt_fgenesh1_pg.C_sca_2_chr3_3_00460
Nectria haematococca
estExt_fgenesh1_pg.C_sca_2_chr3_3_00460
I
estExt_fgenesh3_kg.C_20222
Neurospora discreta
estExt_fgenesh3_kg.C_20222
I
estExt_fgenesh3_pm.C_60520
Neurospora discreta
estExt_fgenesh3_pm.C_60520
I
estExt_fgeneshPB_pg.C_10616
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_10616
I
estExt_Genewise1.C_20182
Mycosphaerella fijiensis
estExt_Genewise1.C_20182
I
estExt_Genewise1Plus.C_40021
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_40021
I
estExt_Genewise1Plus.C_90094
Cryphonectria parasitica
estExt_Genewise1Plus.C_90094
I
estExt_Genewise1Plus.C_sca_2_chr3_3_01039
Nectria haematococca
estExt_Genewise1Plus.C_sca_2_chr3_3_01039
I
EURHEDRAFT_409443
Aspergillus ruber
EURHEDRAFT_409443
I
e_gw1.00771.352.1
Aspergillus carbonarius
e_gw1.00771.352.1
I
e_gw1.13.356.1
Mycosphaerella graminicola
e_gw1.13.356.1
I
F503_05471
Ophiostoma piceae uamh
F503_05471
I
F503_06201
Ophiostoma piceae uamh
F503_06201
I
FFUJ_06219
Fusarium fujikuroi
FFUJ_06219
I
FFUJ_06324
Fusarium fujikuroi
FFUJ_06324
I
fgeneshMC_pg.2_#_504
Mucor circinelloides
fgeneshMC_pg.2_#_504
I
FGRRES_08800
Fusarium graminearum
FGRRES_08800
I
FGRRES_13313_M
Fusarium graminearum
FGRRES_13313_M
I
FOXG_02993
Fusarium oxysporum
FOXG_02993
I
FPSE_11731
Fusarium pseudograminearum
FPSE_11731
I
FPSE_11967
Fusarium pseudograminearum
FPSE_11967
I
FVEG_01844
Fusarium verticillioides
FVEG_01844
I
FVEG_01956
Fusarium verticillioides
FVEG_01956
I
G647_03229
Cladophialophora carrionii
G647_03229
I
G647_08434
Cladophialophora carrionii
G647_08434
I
GALMADRAFT_217801
Galerina marginata
GALMADRAFT_217801
N
GGTG_04663
Gaeumannomyces graminis
GGTG_04663
I
GLOINDRAFT_120758
Rhizophagus irregularis
GLOINDRAFT_120758
I
GLRG_02502
Colletotrichum graminicola
GLRG_02502
I
GLRG_05388
Colletotrichum graminicola
GLRG_05388
I
GMDG_07872
Pseudogymnoascus destructans
GMDG_07872
I
GMDG_08493
Pseudogymnoascus destructans
GMDG_08493
I
GSTUM_00000600001
Tuber melanosporum
GSTUM_00000600001
I
GSTUM_00002563001
Tuber melanosporum
GSTUM_00002563001
I
H072_3382
Dactylellina haptotyla
H072_3382
I
H101_02345
Trichophyton interdigitale
H101_02345
I
H101_05542
Trichophyton interdigitale
H101_05542
I
H102_05196
Trichophyton rubrum
H102_05196
I
H102_08445
Trichophyton rubrum
H102_08445
I
H105_05218
Trichophyton soudanense
H105_05218
I
HMPREF1120_08988
Exophiala dermatitidis
HMPREF1120_08988
I
HMPREF1541_10554
Cyphellophora europaea
HMPREF1541_10554
I
HMPREF1624_00195
Sporothrix schenckii
HMPREF1624_00195
I
HMPREF1624_04787
Sporothrix schenckii
HMPREF1624_04787
I
HYDPIDRAFT_161884
Hydnomerulius pinastri
HYDPIDRAFT_161884
N
K443DRAFT_677716
Laccaria amethystina
K443DRAFT_677716
N
LACBIDRAFT_242593
Laccaria bicolor
LACBIDRAFT_242593
N
LEMA_P113690.1
Leptosphaeria maculans
LEMA_P113690.1
I
M378DRAFT_66555
Amanita muscaria
M378DRAFT_66555
N
M404DRAFT_43642
Pisolithus tinctorius
M404DRAFT_43642
N
M413DRAFT_232462
Hebeloma cylindrosporum
M413DRAFT_232462
N
M7I_2756
Glarea lozoyensis
M7I_2756
I
M7I_5161
Glarea lozoyensis
M7I_5161
I
MAC_03525
Metarhizium acridum
MAC_03525
I
MAJ_00150
Metarhizium majus
MAJ_00150
I
MAJ_03937
Metarhizium majus
MAJ_03937
I
MAM_00786
Metarhizium album
MAM_00786
I
MAM_03270
Metarhizium album
MAM_03270
I
MANI_016891
Metarhizium anisopliae
MANI_016891
I
MANI_028570
Metarhizium anisopliae
MANI_028570
I
MAPG_10727
Magnaporthe poae
MAPG_10727
I
MBM_06265
Marssonina brunnea
MBM_06265
I
MBM_06431
Marssonina brunnea
MBM_06431
I
MBR_02489
Metarhizium brunneum
MBR_02489
I
MBR_08061
Metarhizium brunneum
MBR_08061
I
MCYG_03346
Microsporum canis
MCYG_03346
I
MCYG_03346
Arthroderma otae
MCYG_03346
I
MCYG_04996
Microsporum canis
MCYG_04996
I
MCYG_04996
Arthroderma otae
MCYG_04996
I
MGG_02632
Magnaporthe oryzae
MGG_02632
I
MGG_12814
Magnaporthe oryzae
MGG_12814
I
MGU_00524
Metarhizium guizhouense
MGU_00524
I
MGU_03543
Metarhizium guizhouense
MGU_03543
I
MGYG_00508
Microsporum gypseum
MGYG_00508
I
MGYG_07857
Microsporum gypseum
MGYG_07857
I
MYCFIDRAFT_49331
Pseudocercospora fijiensis
MYCFIDRAFT_49331
I
Mycgr3G51498
Zymoseptoria tritici
Mycgr3G51498
I
MYCTH_2298160
Myceliophthora thermophila
MYCTH_2298160
I
NCU01994
Neurospora crassa
NCU01994
D
NCU03905
Neurospora crassa
NCU03905
D
NechaG67451
Fusarium solani
NechaG67451
I
NechaG99622
Fusarium solani
NechaG99622
I
NEUTE1DRAFT_88066
Neurospora tetrasperma
NEUTE1DRAFT_88066
I
NEUTE1DRAFT_89466
Neurospora tetrasperma
NEUTE1DRAFT_89466
I
OCS_02510
Ophiocordyceps sinensis
OCS_02510
I
OCS_05600
Ophiocordyceps sinensis
OCS_05600
I
OIDMADRAFT_110220
Oidiodendron maius
OIDMADRAFT_110220
I
OIDMADRAFT_198759
Oidiodendron maius
OIDMADRAFT_198759
I
PAAG_05122
Paracoccidioides sp lutzii
PAAG_05122
I
PABG_04569
Paracoccidioides brasiliensis
PABG_04569
I
Pc12g16510
Penicillium chrysogenum
Pc12g16510
I
Pc18g00030
Penicillium chrysogenum
Pc18g00030
I
PCH_Pc12g16510
Penicillium rubens
PCH_Pc12g16510
I
PCH_Pc18g00030
Penicillium rubens
PCH_Pc18g00030
I
PDE_05394
Penicillium oxalicum
PDE_05394
I
PDIP_75650
Penicillium digitatum
PDIP_75650
I
PEX1_067480
Penicillium expansum
PEX1_067480
I
PFICI_02800
Pestalotiopsis fici
PFICI_02800
I
PHLGIDRAFT_129508
Phlebiopsis gigantea
PHLGIDRAFT_129508
N
PILCRDRAFT_818339
Piloderma croceum
PILCRDRAFT_818339
N
PITC_036100
Penicillium italicum
PITC_036100
I
PLEOSDRAFT_1111247
Pleurotus ostreatus
PLEOSDRAFT_1111247
N
PMAA_045020
Talaromyces marneffei
PMAA_045020
I
PMAA_045020
Penicillium marneffei
PMAA_045020
I
PMAA_063050
Talaromyces marneffei
PMAA_063050
I
PMAA_063050
Penicillium marneffei
PMAA_063050
I
PODANS_1_20350
Podospora anserina
PODANS_1_20350
I
PTRG_07150
Pyrenophora triticirepentis
PTRG_07150
I
PTT_08596
Pyrenophora teres
PTT_08596
I
PV04_07297
Capronia semiimmersa
PV04_07297
I
PV05_03710
Exophiala xenobiotica
PV05_03710
I
PV05_09803
Exophiala xenobiotica
PV05_09803
I
PV06_05518
Exophiala oligosperma
PV06_05518
I
PV06_06768
Exophiala oligosperma
PV06_06768
I
PV07_08431
Cladophialophora immunda
PV07_08431
I
PV07_10932
Cladophialophora immunda
PV07_10932
I
PV08_01459
Exophiala spinifera
PV08_01459
I
PV08_07641
Exophiala spinifera
PV08_07641
I
PV09_01442
Verruconis gallopava
PV09_01442
I
PV09_04486
Verruconis gallopava
PV09_04486
I
PV10_06310
Exophiala mesophila
PV10_06310
I
PV11_09617
Exophiala sideris
PV11_09617
I
PVAR5_0698
Byssochlamys spectabilis
PVAR5_0698
I
RO3G_00882
Rhizopus oryzae
RO3G_00882
I
S40285_07743
Stachybotrys chlorohalonata
S40285_07743
I
S40288_03446
Stachybotrys chartarum
S40288_03446
I
SAPIO_CDS6640
Scedosporium apiospermum
SAPIO_CDS6640
I
SBOR_5107
Sclerotinia borealis
SBOR_5107
I
SCHCODRAFT_79748
Schizophyllum commune
SCHCODRAFT_79748
N
SCLCIDRAFT_18203
Scleroderma citrinum
SCLCIDRAFT_18203
N
SERLA73DRAFT_78019
Serpula lacrymans
SERLA73DRAFT_78019
N
SETTUDRAFT_111603
Setosphaeria turcica
SETTUDRAFT_111603
I
SMAC_05437
Sordaria macrospora
SMAC_05437
I
SMAC_06328
Sordaria macrospora
SMAC_06328
I
SNOG_00166
Stagonospora nodorum
SNOG_00166
I
SNOG_00166
Phaeosphaeria nodorum
SNOG_00166
I
SNOG_06296
Stagonospora nodorum
SNOG_06296
I
SPBR_06880
Sporothrix brasiliensis
SPBR_06880
I
SS1G_02552
Sclerotinia sclerotiorum
SS1G_02552
I
SS1G_09561
Sclerotinia sclerotiorum
SS1G_09561
I
TEQG_00858
Trichophyton equinum
TEQG_00858
I
TEQG_02725
Trichophyton equinum
TEQG_02725
I
TESG_06189
Trichophyton tonsurans
TESG_06189
I
TESG_06643
Trichophyton tonsurans
TESG_06643
I
THITE_2111586
Thielavia terrestris
THITE_2111586
I
TRIATDRAFT_164087
Trichoderma atroviride
TRIATDRAFT_164087
I
TRIATDRAFT_300980
Trichoderma atroviride
TRIATDRAFT_300980
I
TRIREDRAFT_49854
Trichoderma reesei
TRIREDRAFT_49854
I
TRIREDRAFT_74576
Trichoderma reesei
TRIREDRAFT_74576
I
TRIVIDRAFT_115051
Trichoderma virens
TRIVIDRAFT_115051
I
TRIVIDRAFT_150786
Trichoderma virens
TRIVIDRAFT_150786
I
TRV_04392
Trichophyton verrucosum
TRV_04392
I
TRV_06106
Trichophyton verrucosum
TRV_06106
I
TSTA_034220
Talaromyces stipitatus
TSTA_034220
I
TSTA_082530
Talaromyces stipitatus
TSTA_082530
I
U727_00433932361
Penicillium solitum
U727_00433932361
I
UCREL1_7025
Eutypa lata
UCREL1_7025
I
UCRNP2_115
Neofusicoccum parvum
UCRNP2_115
I
UCRPA7_5501
Togninia minima
UCRPA7_5501
I
UREG_01309
Uncinocarpus reesii
UREG_01309
I
UREG_05510
Uncinocarpus reesii
UREG_05510
I
UV8b_1784
Ustilaginoidea virens
UV8b_1784
I
UV8b_489
Ustilaginoidea virens
UV8b_489
I
V499_08520
Pseudogymnoascus pannorum
V499_08520
I
VDAG_01588
Verticillium dahliae
VDAG_01588
I
VDBG_08090
Verticillium albo atrum
VDBG_08090
I
VDBG_08090
Verticillium alfalfae
VDBG_08090
I
VHEMI06877
Torrubiella hemipterigena
VHEMI06877
I
VHEMI07796
Torrubiella hemipterigena
VHEMI07796
I
W97_07866
Coniosporium apollinis
W97_07866
I
X797_000525
Metarhizium robertsii
X797_000525
I
X797_006365
Metarhizium robertsii
X797_006365
I
Z517_08992
Fonsecaea pedrosoi
Z517_08992
I
Z517_09948
Fonsecaea pedrosoi
Z517_09948
I
Z518_07428
Rhinocladiella mackenziei
Z518_07428
I
Z518_09068
Rhinocladiella mackenziei
Z518_09068
I
Z519_05838
Cladophialophora bantiana
Z519_05838
I
Z519_07376
Cladophialophora bantiana
Z519_07376
I