CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Cmyd_10017689 *(Chelonia mydas)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00010 (HLH)	IPR001092	Cmyd_10017689	T047118_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Tfap4 M01717_2.00	Mus musculus	VHCABVYGB	VCRBVTGDB	PBM Weirauch et al.(2014) pTH5067	0.914	1.000
TFAP4 M02776_2.00	Homo sapiens	AWCAGCTGWY	RWCAGCTGWT	SELEX Jolma et al.(2013) TFAP4_1	0.914	1.000
TFAP4 M02777_2.00	Homo sapiens	AWCAGCTGWT	AWCAGCTGWT	SELEX Jolma et al.(2013) TFAP4_2	0.914	1.000
TFAP4 M04066_2.00	Homo sapiens	VHCAKVTGDB	VHCABMTGDB	SELEX Yin et al.(2017) TFAP4_eDBD_HT-SELEX_1	0.914	1.000
TFAP4 M04067_2.00	Homo sapiens	VWCAGCTGWB	VWCAGCTGWB	SELEX Yin et al.(2017) TFAP4_eDBD_HT-SELEX_2	0.914	1.000
TFAP4 M04070_2.00	Homo sapiens	RHCAYVTGDB	VHCABRTGDY	SELEX Yin et al.(2017) TFAP4_FL_HT-SELEX_1	0.914	1.000
TFAP4 M04071_2.00	Homo sapiens	VHCAGCTGDB	VHCAGCTGDB	SELEX Yin et al.(2017) TFAP4_FL_HT-SELEX_2	0.914	1.000
TFAP4 M08712_2.00	Homo sapiens	VMNCAGCTGR	YCAGCTGNKB	Misc Kulakovskiy et al.(2013) TFAP4_HUMAN.H11MO.0.A	0.914	1.000
TFAP4 M09453_2.00	Homo sapiens	NVHCAGCTGD	HCAGCTGDBN	Misc Heinz et al.(2010) AML-Tfap4_GSE45738	0.914	1.000
TFAP4 M09802_2.00	Homo sapiens	MNGNCHVCAGCTGDBBBW	WVVVHCAGCTGBDGNCNK	Transfac Matys et al.(2006) V$AP4_01	0.914	1.000
TFAP4 M09803_2.00	Homo sapiens	NNSAGCTGHB	VDCAGCTSNN	Transfac Matys et al.(2006) V$AP4_Q5	0.914	1.000
TFAP4 M09804_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AP4_Q6_01	0.914	1.000
TFAP4 M09805_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AP4_Q6_02	0.914	1.000
TFAP4 M09806_2.00	Homo sapiens	NVCAGCTGHB	VDCAGCTGBN	Transfac Matys et al.(2006) V$AP4_Q6	0.914	1.000
TFAP4 M04068_2.00	Homo sapiens	DHCABMTGDN	NHCAKVTGDH	SELEX Yin et al.(2017) TFAP4_eDBD_Methyl-HT-SELEX_1	0.914	1.000
TFAP4 M04069_2.00	Homo sapiens	AWCAGCTGWT	AWCAGCTGWT	SELEX Yin et al.(2017) TFAP4_eDBD_Methyl-HT-SELEX_2	0.914	1.000
TFAP4 M04072_2.00	Homo sapiens	VHCABVTGDB	VHCABVTGDB	SELEX Yin et al.(2017) TFAP4_FL_Methyl-HT-SELEX_1	0.914	1.000
TFAP4 M04073_2.00	Homo sapiens	VHCAGCTGDB	VHCAGCTGDB	SELEX Yin et al.(2017) TFAP4_FL_Methyl-HT-SELEX_2	0.914	1.000
crp M03595_2.00	Drosophila melanogaster	AACAGCTGWT	AWCAGCTGTT	SELEX Nitta et al.(2015) crp_1	0.843	0.808
crp M05937_2.00	Drosophila melanogaster	VAHCAGCTGAY	RTCAGCTGDWB	B1H Zhu et al.(2011) crp_SANGER_10_FBgn0001994	0.843	0.808
For this family, TFs with SR scores > 0.838* will likely have a similar motif*