cassava8594.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava8594.m1 T048122_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK03576.1
M01119_2.00 		Cannabis sativa
NCACGTGCN
NGCACGTGN		 PBM
Lambert et al.(2019)
pTH10095 		0.842 0.729
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava8594.m1 bHLH 144 192

Links

Other bHLH family TFs
Other Manihot esculenta TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH2 Arabidopsis thaliana AT1G63650 N 0.854
GL3 Arabidopsis thaliana AT5G41315 I 0.878
BGIOSGA003819 Oryza indica BGIOSGA003819 N 0.853
BGIOSGA003821 Oryza indica BGIOSGA003821 N 0.853
BGIOSGA014565 Oryza indica BGIOSGA014565 N 0.853
BGIOSGA014566 Oryza indica BGIOSGA014566 N 0.851
BGIOSGA014567 Oryza indica BGIOSGA014567 N 0.853
BGIOSGA015472 Oryza indica BGIOSGA015472 N 0.853
Bo4g141990 Brassica oleracea Bo4g141990 I 0.878
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N 0.854
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.878
Bra025508 Brassica rapa Bra025508 I 0.878
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N 0.854
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.878
Carubv10019965m.g Capsella rubella Carubv10019965m.g N 0.854
cassava36456.valid.m1 Manihot esculenta cassava36456.valid.m1 I 0.848
Ca_05750 Cicer arietinum Ca_05750 I 0.856
F775_10624 Aegilops tauschii F775_10624 N 0.853
F775_18830 Aegilops tauschii F775_18830 N 0.840
F775_19744 Aegilops tauschii F775_19744 N 0.840
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N 0.854
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.878
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.880
GLYMA08G01810 Glycine max GLYMA08G01810 I 0.856
LjSGA_008146.1 Lotus japonicus LjSGA_008146.1 I 0.856
LPERR04G17380 Leersia perrieri LPERR04G17380 N 0.840
LPERR08G11070 Leersia perrieri LPERR08G11070 N 0.838
mgf005803m Mimulus guttatus mgf005803m I 0.879
MLOC_38470 Hordeum vulgare MLOC_38470 N 0.853
MTR_8g098275 Medicago truncatula MTR_8g098275 I 0.856
OB01G30110 Oryza brachyantha OB01G30110 N 0.851
OB04G28350 Oryza brachyantha OB04G28350 N 0.853
OB04G28380 Oryza brachyantha OB04G28380 N 0.853
OB04G28390 Oryza brachyantha OB04G28390 N 0.853
OBART01G20350 Oryza barthii OBART01G20350 N 0.853
OBART04G21320 Oryza barthii OBART04G21320 N 0.853
OBART04G21370 Oryza barthii OBART04G21370 N 0.853
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N 0.853
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N 0.853
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N 0.851
OLONG_009946 Oryza longistaminata OLONG_009946 N 0.853
OLONG_016958 Oryza longistaminata OLONG_016958 N 0.853
OLONG_016960 Oryza longistaminata OLONG_016960 N 0.851
OMERI01G18770 Oryza meridionalis OMERI01G18770 N 0.853
OMERI04G17790 Oryza meridionalis OMERI04G17790 N 0.853
OMERI04G17820 Oryza meridionalis OMERI04G17820 N 0.853
ONIVA01G22980 Oryza nivara ONIVA01G22980 N 0.853
ONIVA04G19650 Oryza nivara ONIVA04G19650 N 0.853
ONIVA04G19860 Oryza nivara ONIVA04G19860 N 0.851
OPUNC04G19030 Oryza punctata OPUNC04G19030 N 0.851
OPUNC04G19040 Oryza punctata OPUNC04G19040 N 0.853
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N 0.853
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N 0.851
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N 0.853
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N 0.853
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N 0.853
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N 0.851
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N 0.853
OS04G0557200 Oryza sativa OS04G0557200 N 0.853
OS04G0557800 Oryza sativa OS04G0557800 N 0.840
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N 0.851
PK03576.1 Cannabis sativa PK03576.1 D 0.842
Pm023805 Prunus mume Pm023805 I 0.880
POPTR_0003s12810 Populus trichocarpa POPTR_0003s12810 I 0.873
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.880
SapurV1A.0612s0160 Salix purpurea SapurV1A.0612s0160 N 0.869
Sb06g016380 Sorghum bicolor Sb06g016380 N 0.887
TCM_016261 Theobroma cacao TCM_016261 I 0.867
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.878
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N 0.853
TRIUR3_18279 Triticum urartu TRIUR3_18279 N 0.853
TRIUR3_26157 Triticum urartu TRIUR3_26157 N 0.853
TRIUR3_35186 Triticum urartu TRIUR3_35186 N 0.840
VIT_02s0025g03450 Vitis vinifera VIT_02s0025g03450 N 0.843