CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.169240
(
Cucumis sativus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cucsa.169240
T048187_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18401.1
M01126_2.00
Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN
PBM
Lambert et al.(2019)
pTH11272
0.887
0.843
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.169240.1
bHLH
53
103
RRVQKADREKLRRGRLNEQFVELGNILDPDRPKNDKATILMDTIQLLKDLT
Links
Other
bHLH
family TFs
Other
Cucumis sativus
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIATDRAFT_86733
Trichoderma atroviride
TRIATDRAFT_86733
N
VHEMI07196
Torrubiella hemipterigena
VHEMI07196
N