Cucsa.218800 (Cucumis sativus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cucsa.218800 T048199_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.912 0.820
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.884 0.620
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.860 0.600
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.860 0.600
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.860 0.600
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.860 0.580
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.860 0.580
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.849 0.580
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.600
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.218800.1 bHLH 162 211

Links

Other bHLH family TFs
Other Cucumis sativus TFs

565 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AUEXF2481DRAFT_1777 Aureobasidium subglaciale AUEXF2481DRAFT_1777 N
BAUCODRAFT_48224 Baudoinia compniacensis BAUCODRAFT_48224 N
ATEG_10323 Aspergillus terreus CADATEAG00001852 N
DOTSEDRAFT_146525 Dothistroma septosporum DOTSEDRAFT_146525 N
estExt_fgenesh1_pg.C_chr_100311 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_100311 N
fgeneshMC_pg.2_#_284 Mucor circinelloides fgeneshMC_pg.2_#_284 I
M438DRAFT_278143 Aureobasidium pullulans M438DRAFT_278143 N
Mycgr3G111096 Zymoseptoria tritici Mycgr3G111096 N
SEPMUDRAFT_147399 Sphaerulina musiva SEPMUDRAFT_147399 N
WALSEDRAFT_58028 Wallemia sebi WALSEDRAFT_58028 N