e_gw1.11.52.1 (Physcomitrella patens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 e_gw1.11.52.1 T048254_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.911 0.854
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.887 0.875
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.887 0.875
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.887 0.875
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.887 0.854
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.887 0.833
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.879 0.562
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.876 0.854
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.840 0.500
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.11.52.1 bHLH 407 454

Links

Other bHLH family TFs
Other Physcomitrella patens TFs

640 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1400010135 Ostreococcus tauri 1400010135 I
AMTR_s00046p00227790 Amborella trichopoda AMTR_s00046p00227790 N
Bcin01g08840 Botrytis cinerea Bcin01g08840 I
BGHDH14_bgh04339 Blumeria graminis BGHDH14_bgh04339 I
BXY_0337700 Bursaphelenchus xylophilus BXY_0337700 N
CFIO01_13531 Colletotrichum fioriniae CFIO01_13531 I
CGGC5_9539 Colletotrichum gloeosporioides CGGC5_9539 I
CH063_04081 Colletotrichum higginsianum CH063_04081 I
CPUR_04901 Claviceps purpurea CPUR_04901 I
CSUB01_00364 Colletotrichum sublineola CSUB01_00364 I
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I
EPUS_09213 Endocarpon pusillum EPUS_09213 I
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I
ETH_00031100 Eimeria tenella ETH_00031100 I
Ssrp Drosophila melanogaster FBgn0010278 N
Ssrp Drosophila pseudoobscura FBgn0078456 N
GF12460 Drosophila ananassae FBgn0089497 N
GG19998 Drosophila erecta FBgn0112197 N
GH21151 Drosophila grimshawi FBgn0128613 N
GL11071 Drosophila persimilis FBgn0148681 N
GD25013 Drosophila simulans FBgn0196325 N
GJ21774 Drosophila virilis FBgn0208892 N
GE11532 Drosophila yakuba FBgn0229332 N
GLRG_01394 Colletotrichum graminicola GLRG_01394 I
HCOI01912600 Haemonchus contortus HCOI01912600 I
HCOI01913300 Haemonchus contortus HCOI01913300 I
LCUP005047 Lucilia cuprina LCUP005047 N
LDEC020995 Leptinotarsa decemlineata LDEC020995 N
M7I_1578 Glarea lozoyensis M7I_1578 I
MBM_02410 Marssonina brunnea MBM_02410 I
MDOA007633 Musca domestica MDOA007633 N
MGG_01641 Magnaporthe oryzae MGG_01641 I
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I
NCU02819 Neurospora crassa NCU02819 D
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I
OPUNC01G05380 Oryza punctata OPUNC01G05380 N
OPUNC02G20230 Oryza punctata OPUNC02G20230 N
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I
PODANS_1_7390 Podospora anserina PODANS_1_7390 I
POPTR_0017s11460 Populus trichocarpa POPTR_0017s11460 I
PV09_01265 Verruconis gallopava PV09_01265 I
RO3G_05645 Rhizopus oryzae RO3G_05645 N
RO3G_12049 Rhizopus oryzae RO3G_12049 N
SapurV1A.0447s0140 Salix purpurea SapurV1A.0447s0140 I
SBOR_0403 Sclerotinia borealis SBOR_0403 I
SEPMUDRAFT_150255 Sphaerulina musiva SEPMUDRAFT_150255 I
SMAC_00615 Sordaria macrospora SMAC_00615 I
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I
THITE_2121767 Thielavia terrestris THITE_2121767 I
VDAG_04140 Verticillium dahliae VDAG_04140 I
VDAG_09161 Verticillium dahliae VDAG_09161 I
VDBG_04589 Verticillium alfalfae VDBG_04589 I
VDBG_04589 Verticillium albo atrum VDBG_04589 I
YALI0_C11671g Yarrowia lipolytica YALI0_C11671g I