estExt_fgenesh2_pg.C_2400032 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh2_pg.C_2400032 T048394_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dimm
M03613_2.00 		Drosophila melanogaster
BDCCATATGGHV
BDCCATATGGHV		 SELEX
Nitta et al.(2015)
dimm_1 		0.862 0.827
dimm
M03614_2.00 		Drosophila melanogaster
BACCATATGGTV
BACCATATGGTV		 SELEX
Nitta et al.(2015)
dimm_2 		0.862 0.827
dimm
M05976_2.00 		Drosophila melanogaster
HCCATATGGYG
CRCCATATGGD		 B1H
Zhu et al.(2011)
dimm_da_SANGER_5_FBgn0023091 		0.862 0.827
Bhlha15
M01749_2.00 		Mus musculus
RCATATGS
SCATATGY		 PBM
Weirauch et al.(2014)
pTH4582 		0.847 0.808
BHLHA15
M02803_2.00 		Homo sapiens
AMCATATGKH
DMCATATGKT		 SELEX
Jolma et al.(2013)
BHLHA15_1 		0.847 0.808
BHLHA15
M04195_2.00 		Homo sapiens
VVCAGCTGBN
NVCAGCTGBB		 SELEX
Yin et al.(2017)
BHLHA15_eDBD_HT-SELEX_1 		0.847 0.808
BHLHA15
M04196_2.00 		Homo sapiens
NVCATATGBN
NVCATATGBN		 SELEX
Yin et al.(2017)
BHLHA15_eDBD_HT-SELEX_2 		0.847 0.808
BHLHA15
M08739_2.00 		Homo sapiens
VVRRCAGCTGK
MCAGCTGYYBB		 Misc
Kulakovskiy et al.(2013)
BHA15_HUMAN.H11MO.0.B 		0.847 0.808
Bhlha15
M08774_2.00 		Mus musculus
VVRRCAGCTGK
MCAGCTGYYBB		 Misc
Kulakovskiy et al.(2013)
BHA15_MOUSE.H11MO.0.A 		0.847 0.808
BHLHA15
M04197_2.00 		Homo sapiens
VVCAGCTGKB
VMCAGCTGBB		 SELEX
Yin et al.(2017)
BHLHA15_eDBD_Methyl-HT-SELEX_1 		0.847 0.808
BHLHA15
M04198_2.00 		Homo sapiens
DVCATATGBH
DVCATATGBH		 SELEX
Yin et al.(2017)
BHLHA15_eDBD_Methyl-HT-SELEX_2 		0.847 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_2400032 bHLH 109 161

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_05423 Capronia coronata A1O1_05423 N
A1O5_02739 Cladophialophora psammophila A1O5_02739 N
A1O7_06930 Cladophialophora yegresii A1O7_06930 N
G647_03163 Cladophialophora carrionii G647_03163 N
HMPREF1541_08176 Cyphellophora europaea HMPREF1541_08176 N
PV04_07353 Capronia semiimmersa PV04_07353 N
PV05_05543 Exophiala xenobiotica PV05_05543 N
PV06_00184 Exophiala oligosperma PV06_00184 N
PV07_11032 Cladophialophora immunda PV07_11032 N
PV08_04430 Exophiala spinifera PV08_04430 N
PV10_03176 Exophiala mesophila PV10_03176 N
PV11_00924 Exophiala sideris PV11_00924 N
Z517_02439 Fonsecaea pedrosoi Z517_02439 N
Z518_09597 Rhinocladiella mackenziei Z518_09597 N
Z519_07272 Cladophialophora bantiana Z519_07272 N