fgenesh2_pg.scaffold_279000045 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 fgenesh2_pg.scaffold_279000045 T048585_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.879 0.796
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.879 0.796
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.879 0.796
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.879 0.796
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.879 0.796
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.879 0.796
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.879 0.796
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.879 0.796
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.879 0.796
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_279000045 bHLH 89 142

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R011602 Aptenodytes forsteri Afo_R011602 N
ZBTB46 Anolis carolinensis ENSACAG00000003631 N
ENSAMXG00000017494 Astyanax mexicanus ENSAMXG00000017494 N
ENSAPLG00000014808 Anas platyrhynchos ENSAPLG00000014808 N
ZBTB46 Bos taurus ENSBTAG00000016667 N
ZBTB46 Callithrix jacchus ENSCJAG00000010439 N
ZBTB46 Cavia porcellus ENSCPOG00000002803 N
ENSCSAG00000016647 Chlorocebus sabaeus ENSCSAG00000016647 N
zbtb46 Danio rerio ENSDARG00000078191 N
ENSFALG00000005952 Ficedula albicollis ENSFALG00000005952 N
ZBTB46 Homo sapiens ENSG00000130584 N
ZBTB46 Gallus gallus ENSGALG00000006062 N
ZBTB46 Gorilla gorilla ENSGGOG00000004815 N
ENSLACG00000003648 Latimeria chalumnae ENSLACG00000003648 N
ZBTB46 Loxodonta africana ENSLAFG00000012490 N
ENSLOCG00000005130 Lepisosteus oculatus ENSLOCG00000005130 N
ENSMEUG00000015248 Macropus eugenii ENSMEUG00000015248 N
ZBTB46 Meleagris gallopavo ENSMGAG00000006811 N
ZBTB46 Microcebus murinus ENSMICG00000012871 N
ZBTB46 Myotis lucifugus ENSMLUG00000005283 N
ZBTB46 Macaca mulatta ENSMMUG00000020712 N
ZBTB46 Monodelphis domestica ENSMODG00000017020 N
Zbtb46 Mus musculus ENSMUSG00000027583 N
ZBTB46 Ornithorhynchus anatinus ENSOANG00000004930 N
ZBTB46 Oryctolagus cuniculus ENSOCUG00000026351 N
ZBTB46 Otolemur garnettii ENSOGAG00000000852 N
ENSONIG00000017400 Oreochromis niloticus ENSONIG00000017400 N
zbtb46 Oryzias latipes ENSORLG00000009686 N
ENSP00000303102-D1 Bos grunniens ENSP00000303102-D1 N
ENSPANG00000026190 Papio anubis ENSPANG00000026190 N
ENSPFOG00000005845 Poecilia formosa ENSPFOG00000005845 N
ENSPSIG00000015887 Pelodiscus sinensis ENSPSIG00000015887 N
ZBTB46 Pan troglodytes ENSPTRG00000013754 N
Zbtb46 Rattus norvegicus ENSRNOG00000014592 N
ENSSHAG00000017616 Sarcophilus harrisii ENSSHAG00000017616 N
ENSSTOG00000012003 Ictidomys tridecemlineatus ENSSTOG00000012003 N
ENSTGUG00000007131 Taeniopygia guttata ENSTGUG00000007131 N
zbtb46 Takifugu rubripes ENSTRUG00000004720 N
Myotis_brandtii_Zbtb46_10023447 Myotis brandtii Myotis_brandtii_Zbtb46_10023447 N
Ogr02171 Ophisaurus gracilis Ogr02171 N
Pvit_01331 Pogona vitticeps Pvit_01331 N
zbtb46 Xenopus tropicalis XB-GENE-5847062 N
zbtb46.S Xenopus laevis XB-GENE-5847067 N
XP_002944155 Xenopus tropicalis XP_002944155 N