Cagra.1062s0003 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.1062s0003 T049232_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DYT1
M02654_2.00 		Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA		 SELEX
Mathelier et al.(2014)
MA0580.1 		0.870 0.959
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1062s0003.1.p bHLH 31 79

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CG30401 Drosophila melanogaster FBgn0050401 N
GF11604 Drosophila ananassae FBgn0088644 N
GG20731 Drosophila erecta FBgn0112918 N
GH21351 Drosophila grimshawi FBgn0128813 N
GI20766 Drosophila mojavensis FBgn0143501 N
GL17502 Drosophila persimilis FBgn0155105 N
GM15674 Drosophila sechellia FBgn0170590 N
GD25155 Drosophila simulans FBgn0196467 N
GJ17111 Drosophila virilis FBgn0204288 N
GK15635 Drosophila willistoni FBgn0217640 N
GA30448 Drosophila pseudoobscura FBgn0264585 N