CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_100270
(
Coccomyxa subellipsoidea C169
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
estExt_fgenesh1_pg.C_100270
T049574_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PIF5
M08047_2.00
Arabidopsis thaliana
YCACRTGS
SCAYGTGR
ChIP-seq
Mathelier et al.(2014)
MA0562.1
0.851
0.469
PIF5
M09452_2.00
Arabidopsis thaliana
NNBCAYGTGV
BCACRTGVNN
Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062
0.851
0.469
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
47901
bHLH
112
160
ASRHQAAEQRRRTRINERLDRLRQVVPHAERANTASFLEEVITYIQGLQ
Links
Other
bHLH
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZFP82
Canis familiaris
ENSCAFG00000028475
I
ZFP82
Callithrix jacchus
ENSCJAG00000009436
I
ENSCPOG00000000889
Cavia porcellus
ENSCPOG00000000889
I
ZFP82
Equus caballus
ENSECAG00000021185
I
ZFP82
Homo sapiens
ENSG00000181007
D
ZFP82
Gorilla gorilla
ENSGGOG00000010738
I
ENSMMUG00000019320
Macaca mulatta
ENSMMUG00000019320
I
ENSMMUP00000025379
Macaca fascicularis
ENSMMUP00000025379
I
ENSNLEG00000003051
Nomascus leucogenys
ENSNLEG00000003051
I
ZFP82
Otolemur garnettii
ENSOGAG00000008387
I
ZFP82
Ochotona princeps
ENSOPRG00000015306
I
ENSPANG00000011871
Papio anubis
ENSPANG00000011871
I
ZFP82
Procavia capensis
ENSPCAG00000016111
I
ENSPPYG00000029921
Pongo abelii
ENSPPYG00000029921
I
ZFP82
Pan troglodytes
ENSPTRG00000010894
I
ZFP82
Pteropus vampyrus
ENSPVAG00000014359
I
LOC102547241
Rattus norvegicus
ENSRNOG00000052023
I
Zfp82
Rattus norvegicus
ENSRNOG00000053115
I
ENSSTOG00000028687
Ictidomys tridecemlineatus
ENSSTOG00000028687
I
ZFP82
Tupaia belangeri
ENSTBEG00000005456
I
ENSTSYG00000002433
Tarsius syrichta
ENSTSYG00000002433
I
ZFP82
Tursiops truncatus
ENSTTRG00000013712
I