gene32494-v1.0-hybrid (Fragaria vesca)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 gene32494-v1.0-hybrid T049912_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK03576.1
M01119_2.00 		Cannabis sativa
NCACGTGCN
NGCACGTGN		 PBM
Lambert et al.(2019)
pTH10095 		0.863 0.755
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna32494.1-v1.0-hybrid bHLH 430 478

Links

Other bHLH family TFs
Other Fragaria vesca TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.838
BHLH2 Arabidopsis thaliana AT1G63650 N 0.875
TT8 Arabidopsis thaliana AT4G09820 I 0.844
BHLH127 Arabidopsis thaliana AT4G28815 N 0.843
GL3 Arabidopsis thaliana AT5G41315 I 0.899
Bo4g141990 Brassica oleracea Bo4g141990 I 0.899
Bo9g029230 Brassica oleracea Bo9g029230 N 0.855
Bo9g086910 Brassica oleracea Bo9g086910 N 0.847
Bo9g086920 Brassica oleracea Bo9g086920 N 0.847
Bostr.25463s0338 Boechera stricta Bostr.25463s0338 I 0.844
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N 0.875
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.899
Bra025508 Brassica rapa Bra025508 I 0.899
Bra027653 Brassica rapa Bra027653 N 0.855
Bra027796 Brassica rapa Bra027796 N 0.855
Bra037887 Brassica rapa Bra037887 N 0.847
Cagra.1664s0001 Capsella grandiflora Cagra.1664s0001 I 0.844
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N 0.875
Carubv10002462m.g Capsella rubella Carubv10002462m.g I 0.844
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.899
Carubv10019965m.g Capsella rubella Carubv10019965m.g N 0.875
cassava8594.m1 Manihot esculenta cassava8594.m1 I 0.880
Ca_05750 Cicer arietinum Ca_05750 I 0.890
evm.TU.supercontig_537.2 Carica papaya evm.TU.supercontig_537.2 N 0.838
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N 0.875
TT8 Arabidopsis lyrata fgenesh2_kg.6__2968__AT4G09820.1 I 0.844
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.899
GLYMA05G37770 Glycine max GLYMA05G37770 N 0.870
GLYMA08G01810 Glycine max GLYMA08G01810 I 0.890
Gorai.007G023500 Gossypium raimondii Gorai.007G023500 N 0.858
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.838
LjSGA_008146.1 Lotus japonicus LjSGA_008146.1 I 0.890
mgf005803m Mimulus guttatus mgf005803m I 0.879
MTR_8g098275 Medicago truncatula MTR_8g098275 I 0.890
PK03576.1 Cannabis sativa PK03576.1 D 0.863
Pm023805 Prunus mume Pm023805 I 0.914
POPTR_0003s12810 Populus trichocarpa POPTR_0003s12810 I 0.881
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.914
SapurV1A.0612s0160 Salix purpurea SapurV1A.0612s0160 N 0.857
Sb06g016380 Sorghum bicolor Sb06g016380 N 0.853
TCM_016261 Theobroma cacao TCM_016261 I 0.889
Thhalv10023356m.g Eutrema salsugineum Thhalv10023356m.g N 0.855
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.899
VIT_02s0025g03450 Vitis vinifera VIT_02s0025g03450 N 0.851