Gorai.005G252200 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.005G252200 T049979_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.914 0.922
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G252200.1 bHLH 58 108
Gorai.005G252200.2 bHLH 58 108
Gorai.005G252200.3 bHLH 58 108

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G09160 Brachypodium distachyon BRADI4G09160 N
BRADI4G09170 Brachypodium distachyon BRADI4G09170 N
F775_17626 Aegilops tauschii F775_17626 N
Traes_4AL_04B7D5758 Triticum aestivum Traes_4AL_04B7D5758 N
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N
Traes_4DS_258687ACC Triticum aestivum Traes_4DS_258687ACC N