Pavir.Aa02015 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Aa02015 T050650_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.863 0.804
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa02015.1.p bHLH 36 86
Pavir.Aa02015.2.p bHLH 1 41

Links

Other bHLH family TFs
Other Panicum virgatum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cob_10320 Colletotrichum orbiculare Cob_10320 N 0.000
NechaG85878 Fusarium solani NechaG85878 N 0.000
Pc22g16210 Penicillium chrysogenum Pc22g16210 N 0.000
PCH_Pc22g16210 Penicillium rubens PCH_Pc22g16210 N 0.000