CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J25149
(
Panicum virgatum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pavir.J25149
T050913_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J25149.1.p
bHLH
28
76
GRSHSEAERKRRQRINEHLATLRTLVPSASRMDKAALLGEVVRHVRELR
Links
Other
bHLH
family TFs
Other
Panicum virgatum
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01627
Capronia coronata
A1O1_01627
N
0.000
A1O3_08442
Capronia epimyces
A1O3_08442
N
0.000
BBA_08203
Beauveria bassiana
BBA_08203
I
0.000
BGHDH14_bgh01891
Blumeria graminis
BGHDH14_bgh01891
I
0.000
ACLA_003790
Aspergillus clavatus
CADACLAG00000098
I
0.000
CCM_00925
Cordyceps militaris
CCM_00925
I
0.000
CFIO01_10586
Colletotrichum fioriniae
CFIO01_10586
N
0.000
CGGC5_9554
Colletotrichum gloeosporioides
CGGC5_9554
N
0.000
CH063_12034
Colletotrichum higginsianum
CH063_12034
N
0.000
CHGG_08641
Chaetomium globosum
CHGG_08641
I
0.000
CLUG_05915
Candida lusitaniae
CLUG_05915
N
0.000
CLUG_05915
Clavispora lusitaniae
CLUG_05915
N
0.000
CMQ_5605
Grosmannia clavigera
CMQ_5605
N
0.000
Cob_10954
Colletotrichum orbiculare
Cob_10954
N
0.000
CPUR_07966
Claviceps purpurea
CPUR_07966
N
0.000
CSUB01_04728
Colletotrichum sublineola
CSUB01_04728
N
0.000
CTHT_0045110
Chaetomium thermophilum
CTHT_0045110
I
0.000
estExt_fgenesh1_pg.C_60724
Cryphonectria parasitica
estExt_fgenesh1_pg.C_60724
I
0.000
estExt_fgenesh1_pg.C_chr_1.20230
Pichia stipitis
estExt_fgenesh1_pg.C_chr_1.20230
N
0.000
F503_05129
Ophiostoma piceae uamh
F503_05129
N
0.000
FFUJ_07470
Fusarium fujikuroi
FFUJ_07470
I
0.000
fgeneshTM_pg.13_#_14
Tremella mesenterica
fgeneshTM_pg.13_#_14
N
0.000
FGRRES_10069
Fusarium graminearum
FGRRES_10069
I
0.000
FPSE_00487
Fusarium pseudograminearum
FPSE_00487
I
0.000
FVEG_02704
Fusarium verticillioides
FVEG_02704
I
0.000
GGTG_06963
Gaeumannomyces graminis
GGTG_06963
I
0.000
GLRG_03456
Colletotrichum graminicola
GLRG_03456
N
0.000
HMPREF1120_00016
Exophiala dermatitidis
HMPREF1120_00016
N
0.000
HMPREF1624_00136
Sporothrix schenckii
HMPREF1624_00136
N
0.000
MAC_03890
Metarhizium acridum
MAC_03890
I
0.000
MAJ_05190
Metarhizium majus
MAJ_05190
I
0.000
MAM_05054
Metarhizium album
MAM_05054
I
0.000
MANI_012280
Metarhizium anisopliae
MANI_012280
I
0.000
MBR_04325
Metarhizium brunneum
MBR_04325
I
0.000
MGG_08093
Magnaporthe oryzae
MGG_08093
I
0.000
MGG_09273
Magnaporthe oryzae
MGG_09273
N
0.000
MGU_05613
Metarhizium guizhouense
MGU_05613
I
0.000
MYCTH_2307450
Myceliophthora thermophila
MYCTH_2307450
I
0.000
ff-7
Neurospora crassa
NCU04001
D
0.000
NEUTE1DRAFT_49802
Neurospora tetrasperma
NEUTE1DRAFT_49802
I
0.000
PFICI_06028
Pestalotiopsis fici
PFICI_06028
I
0.000
PICST_66647
Scheffersomyces stipitis
PICST_66647
N
0.000
PMAA_046250
Penicillium marneffei
PMAA_046250
I
0.000
PMAA_046250
Talaromyces marneffei
PMAA_046250
I
0.000
PODANS_4_2530
Podospora anserina
PODANS_4_2530
I
0.000
PV06_11710
Exophiala oligosperma
PV06_11710
N
0.000
PV07_06396
Cladophialophora immunda
PV07_06396
N
0.000
PV11_02024
Exophiala sideris
PV11_02024
N
0.000
S40285_01325
Stachybotrys chlorohalonata
S40285_01325
I
0.000
SAPIO_CDS10703
Scedosporium apiospermum
SAPIO_CDS10703
N
0.000
scaffold_6-snap.550.1
Neurospora discreta
scaffold_6-snap.550.1
I
0.000
SMAC_06177
Sordaria macrospora
SMAC_06177
I
0.000
SPBR_06562
Sporothrix brasiliensis
SPBR_06562
N
0.000
TRIATDRAFT_243083
Trichoderma atroviride
TRIATDRAFT_243083
I
0.000
TRIVIDRAFT_114462
Trichoderma virens
TRIVIDRAFT_114462
I
0.000
TSTA_035500
Talaromyces stipitatus
TSTA_035500
I
0.000
UV8b_8229
Ustilaginoidea virens
UV8b_8229
I
0.000
VDAG_01478
Verticillium dahliae
VDAG_01478
I
0.000
VDBG_04249
Verticillium alfalfae
VDBG_04249
I
0.000
VDBG_04249
Verticillium albo atrum
VDBG_04249
I
0.000
VHEMI00428
Torrubiella hemipterigena
VHEMI00428
I
0.000