Thhalv10007139m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10007139m.g T051202_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.914 1.000
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.879 0.898
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.879 0.898
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.879 0.878
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.879 0.878
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.879 0.857
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.879 0.857
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.846 0.571
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10007139m bHLH 438 486

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

466 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27585.m000144 Ricinus communis 27585.m000144 I
29726.m004094 Ricinus communis 29726.m004094 I
29986.m001656 Ricinus communis 29986.m001656 I
AMTR_s00003p00133970 Amborella trichopoda AMTR_s00003p00133970 I
AMTR_s00003p00135920 Amborella trichopoda AMTR_s00003p00135920 I
AMTR_s00129p00119770 Amborella trichopoda AMTR_s00129p00119770 I
Aquca_003_00658 Aquilegia coerulea Aquca_003_00658 I
Aquca_020_00575 Aquilegia coerulea Aquca_020_00575 I
RAP2-12 Arabidopsis thaliana AT1G53910 D
ERF071 Arabidopsis thaliana AT2G47520 I
RAP2-2 Arabidopsis thaliana AT3G14230 D
BGIOSGA005480 Oryza indica BGIOSGA005480 I
BGIOSGA011328 Oryza indica BGIOSGA011328 I
BGIOSGA022463 Oryza indica BGIOSGA022463 I
BGIOSGA023903 Oryza indica BGIOSGA023903 I
BGIOSGA030816 Oryza indica BGIOSGA030816 I
Bo3g184310 Brassica oleracea Bo3g184310 I
Bo5g130490 Brassica oleracea Bo5g130490 I
Bostr.10273s0115 Boechera stricta Bostr.10273s0115 I
Bostr.25993s0004 Boechera stricta Bostr.25993s0004 I
Bostr.28625s0277 Boechera stricta Bostr.28625s0277 I
Bostr.7128s0090 Boechera stricta Bostr.7128s0090 I
Bra021543 Brassica rapa Bra021543 I
Bra027355 Brassica rapa Bra027355 I
BRADI3G60120 Brachypodium distachyon BRADI3G60120 I
BRADI4G31040 Brachypodium distachyon BRADI4G31040 I
Cagra.0551s0010 Capsella grandiflora Cagra.0551s0010 I
Cagra.0769s0008 Capsella grandiflora Cagra.0769s0008 I
Cagra.1582s0005 Capsella grandiflora Cagra.1582s0005 I
Carubv10009538m.g Capsella rubella Carubv10009538m.g I
Carubv10013925m.g Capsella rubella Carubv10013925m.g I
Carubv10025530m.g Capsella rubella Carubv10025530m.g I
cassava24734.valid.m1 Manihot esculenta cassava24734.valid.m1 I
cassava31609.valid.m1 Manihot esculenta cassava31609.valid.m1 I
cassava31610.valid.m1 Manihot esculenta cassava31610.valid.m1 I
cassava37155.valid.m1 Manihot esculenta cassava37155.valid.m1 I
cassava42230.valid.m1 Manihot esculenta cassava42230.valid.m1 I
cassava42231.valid.m1 Manihot esculenta cassava42231.valid.m1 I
cassava43050.valid.m1 Manihot esculenta cassava43050.valid.m1 I
Ca_03481 Cicer arietinum Ca_03481 I
Ca_03482 Cicer arietinum Ca_03482 I
Ca_14758 Cicer arietinum Ca_14758 I
Ca_16180 Cicer arietinum Ca_16180 I
CHLREDRAFT_205920 Chlamydomonas reinhardtii CHLREDRAFT_205920 I
chr1.CM0442.200.nd Lotus japonicus chr1.CM0442.200.nd I
Ciclev10005701m.g Citrus clementina Ciclev10005701m.g I
Ciclev10021059m.g Citrus clementina Ciclev10021059m.g I
Ciclev10025816m.g Citrus clementina Ciclev10025816m.g I
Cla009438 Citrullus lanatus Cla009438 I
Cla012751 Citrullus lanatus Cla012751 I
Cla015763 Citrullus lanatus Cla015763 I
Cla017662 Citrullus lanatus Cla017662 I
Cla022096 Citrullus lanatus Cla022096 I
Cucsa.069280 Cucumis sativus Cucsa.069280 I
Cucsa.096930 Cucumis sativus Cucsa.096930 I
Cucsa.149280 Cucumis sativus Cucsa.149280 I
Cucsa.252810 Cucumis sativus Cucsa.252810 I
Cucsa.359880 Cucumis sativus Cucsa.359880 I
estExt_fgenesh1_pg.C_170126 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_170126 I
estExt_fgenesh1_pg.C_Chr_04.00010339 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_04.00010339 I
estExt_fgenesh4_pg.C_290069 Volvox carteri estExt_fgenesh4_pg.C_290069 I
Eucgr.H01085 Eucalyptus grandis Eucgr.H01085 I
Eucgr.H03965 Eucalyptus grandis Eucgr.H03965 I
Eucgr.I02155 Eucalyptus grandis Eucgr.I02155 I
EuGene.1100010301 Micromonas sp RCC299 EuGene.1100010301 I
evm.TU.supercontig_151.27 Carica papaya evm.TU.supercontig_151.27 I
evm.TU.supercontig_151.29 Carica papaya evm.TU.supercontig_151.29 I
evm.TU.supercontig_151.30 Carica papaya evm.TU.supercontig_151.30 I
evm.TU.supercontig_2304.1 Carica papaya evm.TU.supercontig_2304.1 I
evm.TU.supercontig_481.1 Carica papaya evm.TU.supercontig_481.1 I
F775_07667 Aegilops tauschii F775_07667 I
F775_15852 Aegilops tauschii F775_15852 I
F775_25662 Aegilops tauschii F775_25662 I
F775_30714 Aegilops tauschii F775_30714 I
F775_31907 Aegilops tauschii F775_31907 I
fgenesh1_pm.chr_4_#_35 Ostreococcus RCC809 fgenesh1_pm.chr_4_#_35 I
gene05448-v1.0-hybrid Fragaria vesca gene05448-v1.0-hybrid I
gene07057-v1.0-hybrid Fragaria vesca gene07057-v1.0-hybrid I
gene11086-v1.0-hybrid Fragaria vesca gene11086-v1.0-hybrid I
GG.C169_S17_00183 Chlorella vulgaris GG.C169_S17_00183 I
GLYMA02G01960 Glycine max GLYMA02G01960 I
GLYMA03G42450 Glycine max GLYMA03G42450 I
GLYMA07G04950 Glycine max GLYMA07G04950 I
GLYMA07G37410 Glycine max GLYMA07G37410 I
GLYMA10G02080 Glycine max GLYMA10G02080 I
GLYMA15G16260 Glycine max GLYMA15G16260 I
GLYMA16G01500 Glycine max GLYMA16G01500 I
GLYMA19G40070 Glycine max GLYMA19G40070 I
GLYMA19G45200 Glycine max GLYMA19G45200 I
Gorai.004G051600 Gossypium raimondii Gorai.004G051600 I
Gorai.004G142800 Gossypium raimondii Gorai.004G142800 I
Gorai.006G260300 Gossypium raimondii Gorai.006G260300 I
Gorai.009G147300 Gossypium raimondii Gorai.009G147300 I
Gorai.010G236100 Gossypium raimondii Gorai.010G236100 I
Gorai.011G056300 Gossypium raimondii Gorai.011G056300 I
Gorai.011G193600 Gossypium raimondii Gorai.011G193600 I
GRMZM2G018398 Zea mays GRMZM2G018398 I
GRMZM2G052667 Zea mays GRMZM2G052667 I
GRMZM2G110333 Zea mays GRMZM2G110333 I
GRMZM2G114820 Zea mays GRMZM2G114820 I
GRMZM2G148333 Zea mays GRMZM2G148333 I
GSMUA_Achr10G31090_001 Musa acuminata GSMUA_Achr10G31090_001 I
GSMUA_Achr11G15810_001 Musa acuminata GSMUA_Achr11G15810_001 I
GSMUA_Achr2G07300_001 Musa acuminata GSMUA_Achr2G07300_001 I
GSMUA_Achr3G05800_001 Musa acuminata GSMUA_Achr3G05800_001 I
GSMUA_Achr3G08170_001 Musa acuminata GSMUA_Achr3G08170_001 I
GSMUA_Achr3G10140_001 Musa acuminata GSMUA_Achr3G10140_001 I
GSMUA_Achr5G24060_001 Musa acuminata GSMUA_Achr5G24060_001 I
GSMUA_Achr6G10870_001 Musa acuminata GSMUA_Achr6G10870_001 I
GSMUA_Achr8G23730_001 Musa acuminata GSMUA_Achr8G23730_001 I
GSMUA_Achr9G18090_001 Musa acuminata GSMUA_Achr9G18090_001 I
GSMUA_AchrUn_randomG09790_001 Musa acuminata GSMUA_AchrUn_randomG09790_001 I
GSMUA_AchrUn_randomG27100_001 Musa acuminata GSMUA_AchrUn_randomG27100_001 I
LjSGA_141699.1 Lotus japonicus LjSGA_141699.1 I
LjT01F24.60.nd Lotus japonicus LjT01F24.60.nd I
LPERR02G28780 Leersia perrieri LPERR02G28780 I
LPERR03G05400 Leersia perrieri LPERR03G05400 I
LPERR06G05580 Leersia perrieri LPERR06G05580 I
LPERR07G19320 Leersia perrieri LPERR07G19320 I
LPERR09G08060 Leersia perrieri LPERR09G08060 I
Lus10003601.g Linum usitatissimum Lus10003601.g I
Lus10008214.g Linum usitatissimum Lus10008214.g I
Lus10013186.g Linum usitatissimum Lus10013186.g I
Lus10016827.g Linum usitatissimum Lus10016827.g I
Lus10037448.g Linum usitatissimum Lus10037448.g I
MDP0000128979 Malus domestica MDP0000128979 I
MDP0000288465 Malus domestica MDP0000288465 I
MDP0000308922 Malus domestica MDP0000308922 I
MDP0000403580 Malus domestica MDP0000403580 I
MDP0000413387 Malus domestica MDP0000413387 I
mgf005222m Mimulus guttatus mgf005222m I
mgf009667m Mimulus guttatus mgf009667m I
mgf010035m Mimulus guttatus mgf010035m I
MLOC_10017 Hordeum vulgare MLOC_10017 I
MLOC_38561 Hordeum vulgare MLOC_38561 I
MLOC_69925 Hordeum vulgare MLOC_69925 I
MLOC_77669 Hordeum vulgare MLOC_77669 I
MLOC_78827 Hordeum vulgare MLOC_78827 I
MTR_1g087920 Medicago truncatula MTR_1g087920 I
MTR_2g105380 Medicago truncatula MTR_2g105380 I
MTR_2g435590 Medicago truncatula MTR_2g435590 I
MTR_8g022820 Medicago truncatula MTR_8g022820 I
OB02G41790 Oryza brachyantha OB02G41790 I
OB06G15590 Oryza brachyantha OB06G15590 I
OB07G27820 Oryza brachyantha OB07G27820 I
OB09G17960 Oryza brachyantha OB09G17960 I
OBART02G34990 Oryza barthii OBART02G34990 I
OBART03G06060 Oryza barthii OBART03G06060 I
OBART06G06020 Oryza barthii OBART06G06020 I
OBART07G22260 Oryza barthii OBART07G22260 I
OBART09G11390 Oryza barthii OBART09G11390 I
OGLUM02G36100 Oryza glumaepatula OGLUM02G36100 I
OGLUM03G06060 Oryza glumaepatula OGLUM03G06060 I
OGLUM06G06300 Oryza glumaepatula OGLUM06G06300 I
OGLUM07G22170 Oryza glumaepatula OGLUM07G22170 I
OGLUM09G11780 Oryza glumaepatula OGLUM09G11780 I
OLONG_007389 Oryza longistaminata OLONG_007389 I
OLONG_008836 Oryza longistaminata OLONG_008836 I
OLONG_013314 Oryza longistaminata OLONG_013314 I
OMERI02G32980 Oryza meridionalis OMERI02G32980 I
OMERI03G05890 Oryza meridionalis OMERI03G05890 I
OMERI06G07210 Oryza meridionalis OMERI06G07210 I
OMERI07G18590 Oryza meridionalis OMERI07G18590 I
OMERI09G08870 Oryza meridionalis OMERI09G08870 I
ONIVA02G37060 Oryza nivara ONIVA02G37060 I
ONIVA03G06080 Oryza nivara ONIVA03G06080 I
ONIVA06G06990 Oryza nivara ONIVA06G06990 I
ONIVA07G20780 Oryza nivara ONIVA07G20780 I
ONIVA09G11170 Oryza nivara ONIVA09G11170 I
OPUNC02G32270 Oryza punctata OPUNC02G32270 I
OPUNC06G05780 Oryza punctata OPUNC06G05780 I
OPUNC07G20890 Oryza punctata OPUNC07G20890 I
OPUNC09G09870 Oryza punctata OPUNC09G09870 I
orange1.1g019887m.g Citrus sinensis orange1.1g019887m.g I
orange1.1g020391m.g Citrus sinensis orange1.1g020391m.g I
orange1.1g025382m.g Citrus sinensis orange1.1g025382m.g I
ORGLA02G0302700 Oryza glaberrima ORGLA02G0302700 I
ORGLA03G0058500 Oryza glaberrima ORGLA03G0058500 I
ORGLA07G0171300 Oryza glaberrima ORGLA07G0171300 I
ORGLA09G0085500 Oryza glaberrima ORGLA09G0085500 I
ORUFI02G36450 Oryza rufipogon ORUFI02G36450 I
ORUFI03G05890 Oryza rufipogon ORUFI03G05890 I
ORUFI06G06250 Oryza rufipogon ORUFI06G06250 I
ORUFI07G23290 Oryza rufipogon ORUFI07G23290 I
ORUFI09G12180 Oryza rufipogon ORUFI09G12180 I
EREBP1 Oryza sativa OS02G0782700 D
OS03G0183000 Oryza sativa OS03G0183000 I
OS06G0194000 Oryza sativa OS06G0194000 I
OS07G0617000 Oryza sativa OS07G0617000 I
OS09G0434500 Oryza sativa OS09G0434500 I
OSTLU_9237 Ostreococcus lucimarinus OSTLU_9237 I
Pavir.Aa00281 Panicum virgatum Pavir.Aa00281 I
Pavir.Bb02257 Panicum virgatum Pavir.Bb02257 I
Pavir.J01991 Panicum virgatum Pavir.J01991 I
Pavir.J04875 Panicum virgatum Pavir.J04875 I
PDK_20s1440861g004 Phoenix dactylifera PDK_20s1440861g004 I
PGSC0003DMG400004898 Solanum tuberosum PGSC0003DMG400004898 I
PGSC0003DMG400009142 Solanum tuberosum PGSC0003DMG400009142 I
PGSC0003DMG400016812 Solanum tuberosum PGSC0003DMG400016812 I
PGSC0003DMG400028853 Solanum tuberosum PGSC0003DMG400028853 I
PGSC0003DMG400031795 Solanum tuberosum PGSC0003DMG400031795 I
PK12109.1 Cannabis sativa PK12109.1 I
PK13470.1 Cannabis sativa PK13470.1 I
PK15234.1 Cannabis sativa PK15234.1 I
Pm008236 Prunus mume Pm008236 I
Pm013172 Prunus mume Pm013172 I
Pm020059 Prunus mume Pm020059 I
POPTR_0001s16400 Populus trichocarpa POPTR_0001s16400 I
POPTR_0002s20270 Populus trichocarpa POPTR_0002s20270 I
POPTR_0003s06930 Populus trichocarpa POPTR_0003s06930 I
POPTR_0010s00900 Populus trichocarpa POPTR_0010s00900 I
POPTR_0014s12090 Populus trichocarpa POPTR_0014s12090 I
PRUPE_ppa006366mg Prunus persica PRUPE_ppa006366mg I
PRUPE_ppa008563mg Prunus persica PRUPE_ppa008563mg I
PRUPE_ppa008730mg Prunus persica PRUPE_ppa008730mg I
Q6TXK7_SOLLC Solanum lycopersicum Q6TXK7_SOLLC I
Q7Y1W2_TOBAC Nicotiana tabacum Q7Y1W2_TOBAC D
Q84XB2_SOLLC Solanum lycopersicum Q84XB2_SOLLC I
SapurV1A.0052s0250 Salix purpurea SapurV1A.0052s0250 I
SapurV1A.0264s0250 Salix purpurea SapurV1A.0264s0250 I
SapurV1A.0494s0080 Salix purpurea SapurV1A.0494s0080 I
SapurV1A.1115s0040 Salix purpurea SapurV1A.1115s0040 I
SapurV1A.1700s0030 Salix purpurea SapurV1A.1700s0030 I
Sb02g025530 Sorghum bicolor Sb02g025530 I
Sb04g035160 Sorghum bicolor Sb04g035160 I
Sb07g022180 Sorghum bicolor Sb07g022180 I
RAP2.12 Arabidopsis lyrata scaffold_105235.1 I
RAP2.2 Arabidopsis lyrata scaffold_301660.1 I
SELMODRAFT_73135 Selaginella moellendorffii SELMODRAFT_73135 I
SELMODRAFT_73138 Selaginella moellendorffii SELMODRAFT_73138 I
Si017568m.g Setaria italica Si017568m.g I
Si030088m.g Setaria italica Si030088m.g I
Si030514m.g Setaria italica Si030514m.g I
Si033388m.g Setaria italica Si033388m.g I
Solyc01g065980.2 Solanum lycopersicum Solyc01g065980.2 I
Solyc03g123500.2 Solanum lycopersicum Solyc03g123500.2 I
Solyc06g063070.2 Solanum lycopersicum Solyc06g063070.2 I
Solyc09g075420.2 Solanum lycopersicum Solyc09g075420.2 I
Solyc12g049560.1 Solanum lycopersicum Solyc12g049560.1 I
TCM_004710 Theobroma cacao TCM_004710 I
TCM_004717 Theobroma cacao TCM_004717 I
TCM_021264 Theobroma cacao TCM_021264 I
TCM_029232 Theobroma cacao TCM_029232 I
Thhalv10011606m.g Eutrema salsugineum Thhalv10011606m.g I
Thhalv10023946m.g Eutrema salsugineum Thhalv10023946m.g I
Traes_5AL_14D9A9844 Triticum aestivum Traes_5AL_14D9A9844 I
Traes_5BL_7F84602F3 Triticum aestivum Traes_5BL_7F84602F3 I
Traes_5DL_26F3B188A Triticum aestivum Traes_5DL_26F3B188A I
Traes_6AL_DAA2D7F8A Triticum aestivum Traes_6AL_DAA2D7F8A I
Traes_6AS_A9D28899F Triticum aestivum Traes_6AS_A9D28899F I
Traes_6BL_6AEADC565 Triticum aestivum Traes_6BL_6AEADC565 I
Traes_6DL_DD82BD107 Triticum aestivum Traes_6DL_DD82BD107 I
TRIUR3_08978 Triticum urartu TRIUR3_08978 I
TRIUR3_20682 Triticum urartu TRIUR3_20682 I
RAP2.3 Vitis vinifera VIT_05s0077g01860 I
HRE2 Vitis vinifera VIT_07s0005g00820 I
VIT_09s0002g00470 Vitis vinifera VIT_09s0002g00470 I