LDEC005027 (Leptinotarsa decemlineata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 LDEC005027 T051499_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.875 0.923
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.875 0.923
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.875 0.923
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.875 0.923
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.875 0.923
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.875 0.923
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.875 0.904
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.875 0.904
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.875 0.904
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.875 0.904
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.875 0.904
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.875 0.904
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.875 0.904
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.875 0.904
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.875 0.904
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.875 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC005027-PA bHLH 23 75

Links

Other bHLH family TFs
Other Leptinotarsa decemlineata TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PIF5 Arabidopsis thaliana AT3G59060 D 0.000
BGIOSGA025137 Oryza indica BGIOSGA025137 I 0.000
Bo4g108070 Brassica oleracea Bo4g108070 I 0.000
BRADI1G06670 Brachypodium distachyon BRADI1G06670 I 0.000
CHLREDRAFT_183777 Chlamydomonas reinhardtii CHLREDRAFT_183777 N 0.000
estExt_fgeneshCV_pg.C_120023 Chlorella vulgaris estExt_fgeneshCV_pg.C_120023 I 0.000
F775_31861 Aegilops tauschii F775_31861 I 0.000
GRMZM5G865967 Zea mays GRMZM5G865967 I 0.000
IGS.gm_8_00085 Chlorella NC64A IGS.gm_8_00085 N 0.000
OB07G12160 Oryza brachyantha OB07G12160 I 0.000
OBART07G02670 Oryza barthii OBART07G02670 I 0.000
OMERI07G01290 Oryza meridionalis OMERI07G01290 I 0.000
ONIVA07G01070 Oryza nivara ONIVA07G01070 I 0.000
ORGLA07G0023700 Oryza glaberrima ORGLA07G0023700 I 0.000
ORUFI07G02530 Oryza rufipogon ORUFI07G02530 I 0.000
OS07G0143200 Oryza sativa OS07G0143200 I 0.000
TRIUR3_14996 Triticum urartu TRIUR3_14996 I 0.000